RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 MSMBP08118 114 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 FREM3P0C091 2139 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 ESDP10768 282 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 ATP1B2P14415 290 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 S100GP29377 79 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 SRD5A2P31213 254 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 GABRA3P34903 492 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 BSGP35613 385 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 GPR6P46095 362 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 GABRA2P47869 451 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 GLIPR1P48060 266 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 HMGA2P52926 109 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 CRISP3P54108 245 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 PIGPP57054 158 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 KRTAP10-3P60369 221 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 CKS1BP61024 79 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 HERV-K104P63124 156 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 SRPXP78539 464 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 CYCSP99999 105 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 RUNX1Q01196 453 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 EGR4Q05215 589 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 AESQ08117 197 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 ST3GAL3Q11203 375 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 DHRS2Q13268 280 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 KIAA0040Q15053 153 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 ZNF678Q5SXM1 525 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 Q8N1X5 172 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 KLHDC1Q8N7A1 406 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 RHEBL1Q8TAI7 183 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 Q8WTZ3 238 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 TMEM170AQ8WVE7 144 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 TMEM239Q8WW34 195 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 FRZBQ92765 325 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 C1orf147Q96MC9 270 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 ZNF75AQ96N20 296 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 AQP10Q96PS8 301 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 CIB3Q96Q77 187 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 YPEL2Q96QA6 119 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 TRIB3Q96RU7 358 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 ABHD1Q96SE0 405 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 TBL1YQ9BQ87 522 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 DOHHQ9BU89 302 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 SCRT1Q9BWW7 348 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 SLC5A7Q9GZV3 580 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 TXNIPQ9H3M7 391 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 BANF2Q9H503 90 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 POPDC3Q9HBV1 291 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 RAB18Q9NP72 206 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 OR6C3Q9NZP0 311 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 SIGLEC7Q9Y286 467 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 STRAPQ9Y3F4 350 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 DNAJC15Q9Y5T4 150 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 EXPH5Q8NEV8 1989 aa4.56□□□□□ -1.68
ECHDC1-206ENST00000417628 TRAV1-2A0A0B4J238 106 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 DPRXA6NFQ7 191 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 ZNF705GA8MUZ8 300 aaPredicted RBP4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 CLDN34H7C241 214 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 SCGNO76038 276 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 NGFP01138 241 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 HLA-DQA2P01906 255 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 HSPB1P04792 205 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 TYMSP04818 313 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 OR4A8P0C604 315 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 ACP2P11117 423 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 NMBRP28336 390 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 CTRLP40313 264 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 UBE2KP61086 200 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 RPL7AP62424 266 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 SELENOWP63302 87 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 PAFAH1B2P68402 229 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 BTG2P78543 158 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 AKR1C1Q04828 323 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 ZNF763Q0D2J5 394 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 MELKQ14680 651 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 RGNQ15493 299 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 POU2AF1Q16633 256 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 TRMT12Q53H54 448 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 ALG10Q5BKT4 473 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 UBE2NLQ5JXB2 153 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 LY6G6FQ5SQ64 297 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 SFXN4Q6P4A7 337 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 TNFAIP8L2Q6P589 184 aaPredicted RBP4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 SBSNQ6UWP8 590 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 NHLRC1Q6VVB1 395 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 PRSS45Q7RTY3 260 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 NEGR1Q7Z3B1 354 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 S100A7AQ86SG5 101 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 UEVLDQ8IX04 471 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 CMTM1Q8IZ96 169 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 OR10G2Q8NGC3 310 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 OR4K17Q8NGC6 315 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 OR4K1Q8NGD4 311 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 TNFAIP8L1Q8WVP5 186 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 TSPAN32Q96QS1 320 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 OR2A5Q96R48 311 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 SIGMAR1Q99720 223 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 RSG1Q9BU20 258 aa4.55□□□□□ -1.68
ECHDC1-206ENST00000417628 VAMP8Q9BV40 100 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms