RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 RRASP10301 218 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 TAS2R46P59540 309 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 SLC35B1P78383 322 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 CDK10Q15131 360 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 PLGLAQ15195 96 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 RTL8BQ17RB0 113 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 LIN54Q6MZP7 749 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 SNX29P2Q8IUI4 249 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 STPG2Q8N412 459 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 DYNC2LI1Q8TCX1 351 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 FLYWCH2Q96CP2 140 aaKnown RBP14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 C5orf30Q96GV9 206 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 NOL4LQ96MY1 436 aaPredicted RBP14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 MMP27Q9H306 513 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 ADAM30Q9UKF2 790 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 H3BMQ9 156 aa14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 J3QRK9 145 aa14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 TPPPO94811 219 aa14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 NAT1P18440 290 aa14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 FCGR2CP31995 323 aa14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 DUTP33316 252 aaKnown RBP14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 LINC00205P59089 165 aa14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 RPS16P62249 146 aaKnown RBP14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 CD83Q01151 205 aa14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 COMMD1Q8N668 190 aa14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 GPX8Q8TED1 209 aa14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 C15orf40Q8WUR7 153 aa14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 HSPB9Q9BQS6 159 aa14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 EXTL2Q9UBQ6 330 aa14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 ZNF580Q9UK33 172 aa14.21□□□□□ -0.13
SEMA3B-201ENST00000416295 TRRAPQ9Y4A5 3859 aa14.21□□□□□ -0.14
SEMA3B-201ENST00000416295 TET2Q6N021 2002 aaPredicted RBP14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 IGKV1D-13A0A0B4J2D9 117 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 LINC01548A6NM66 108 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 SULT1C2O00338 296 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 RGS5O15539 181 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 WIPF1O43516 503 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 TSPAN15O95858 294 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 PPYP01298 95 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 IGKV1-13P0DP09 117 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 AADACP22760 399 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 MSMO1Q15800 293 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 NSUN5P1Q3KNT7 163 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 HIST2H2BDQ6DRA6 164 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 ZNF329Q86UD4 541 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 OR5H2Q8NGV7 314 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 EHFQ9NZC4 300 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 LINC00527Q9UJ94 153 aa14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 RBMX2Q9Y388 322 aaKnown RBP14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 TSSC4Q9Y5U2 329 aaPredicted RBP14.2□□□□□ -0.14
SEMA3B-201ENST00000416295 TCRBV4S1A1TA0A5B7 111 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 IGF1P05019 195 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 VDAC1P21796 283 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 RCVRNP35243 200 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 LGALS7P47929 136 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 TCTEX1D4Q5JR98 221 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 C10orf99Q6UWK7 81 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 KCTD9Q7L273 389 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 BVESQ8NE79 360 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 GIMAP1Q8WWP7 306 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 DDB2Q92466 427 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 HSD17B10Q99714 261 aaKnown RBP14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 OR51J1Q9H342 316 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 FBXL15Q9H469 300 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 METTL1Q9UBP6 276 aaKnown RBP14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 PRELID3BQ9Y3B1 194 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 CEPT1Q9Y6K0 416 aa14.19□□□□□ -0.14
SEMA3B-201ENST00000416295 IGHV7-81A0A0B4J1V7 117 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 CCDC160A6NGH7 325 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 IGLV2-14P01704 120 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 HERV-K104P61576 105 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 DYRK1AQ13627 763 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 PSG5Q15238 335 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 TMEM177Q53S58 311 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 KHDC1LQ5JSQ8 128 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 OVCH2Q7RTZ1 564 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 LAX1Q8IWV1 398 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 OR4F17Q8NGA8 305 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 SECTM1Q8WVN6 248 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 HARBI1Q96MB7 349 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 OR4F4Q96R69 305 aa14.18□□□□□ -0.14
SEMA3B-201ENST00000416295 LINC00473A8K010 186 aa14.17□□□□□ -0.14
SEMA3B-201ENST00000416295 ADARB2-AS1A8MUL3 147 aa14.17□□□□□ -0.14
SEMA3B-201ENST00000416295 SHOXO15266 292 aa14.17□□□□□ -0.14
SEMA3B-201ENST00000416295 PMP2P02689 132 aa14.17□□□□□ -0.14
SEMA3B-201ENST00000416295 ZNF660Q6AZW8 331 aaPredicted RBP14.17□□□□□ -0.14
SEMA3B-201ENST00000416295 TEX38Q6PEX7 206 aa14.17□□□□□ -0.14
SEMA3B-201ENST00000416295 DHRS11Q6UWP2 260 aa14.17□□□□□ -0.14
SEMA3B-201ENST00000416295 ZNF66Q6ZN08 573 aa14.17□□□□□ -0.14
SEMA3B-201ENST00000416295 ZBTB34Q8NCN2 500 aa14.17□□□□□ -0.14
SEMA3B-201ENST00000416295 BORCS5Q969J3 196 aa14.17□□□□□ -0.14
SEMA3B-201ENST00000416295 SLC5A7Q9GZV3 580 aa14.17□□□□□ -0.14
SEMA3B-201ENST00000416295 MIXL1Q9H2W2 232 aa14.17□□□□□ -0.14
SEMA3B-201ENST00000416295 PARP11Q9NR21 331 aa14.17□□□□□ -0.14
SEMA3B-201ENST00000416295 CTDSP2O14595 271 aa14.16□□□□□ -0.14
SEMA3B-201ENST00000416295 ATP6V0E1O15342 81 aa14.16□□□□□ -0.14
SEMA3B-201ENST00000416295 SLC25A17O43808 307 aa14.16□□□□□ -0.14
SEMA3B-201ENST00000416295 CRYZL1O95825 349 aa14.16□□□□□ -0.14
SEMA3B-201ENST00000416295 HLA-DMAP28067 261 aa14.16□□□□□ -0.14
SEMA3B-201ENST00000416295 HRH1P35367 487 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms