RNA–Protein interactions for RNA: ENST00000415569.5

GTDC1-208, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5

Gene GTDC1, Length 2,780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-208ENST00000415569 PPP1R35Q8TAP8 253 aa3.64□□□□□ -1.83
GTDC1-208ENST00000415569 LINC00052Q96N35 136 aa3.64□□□□□ -1.83
GTDC1-208ENST00000415569 TSNAXQ99598 290 aaKnown RBP3.64□□□□□ -1.83
GTDC1-208ENST00000415569 SMIM3Q9BZL3 60 aa3.64□□□□□ -1.83
GTDC1-208ENST00000415569 NGBQ9NPG2 151 aa3.64□□□□□ -1.83
GTDC1-208ENST00000415569 OR6C3Q9NZP0 311 aa3.64□□□□□ -1.83
GTDC1-208ENST00000415569 CTSZQ9UBR2 303 aa3.64□□□□□ -1.83
GTDC1-208ENST00000415569 LPAR3Q9UBY5 353 aa3.64□□□□□ -1.83
GTDC1-208ENST00000415569 CACNG5Q9UF02 275 aa3.64□□□□□ -1.83
GTDC1-208ENST00000415569 PSG11Q9UQ72 335 aa3.64□□□□□ -1.83
GTDC1-208ENST00000415569 MMP24Q9Y5R2 645 aa3.64□□□□□ -1.83
GTDC1-208ENST00000415569 FLNCQ14315 2725 aa3.64□□□□□ -1.83
GTDC1-208ENST00000415569 PIGBOS1A0A0B4J2F0 54 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 B9A039 149 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 JTBO76095 146 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 CD3EP07766 207 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 SPP1P10451 314 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 LORP23490 312 aaPredicted RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 COL8A1P27658 744 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 CASP6P55212 293 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 Q3ZCU0 254 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 ZNF672Q499Z4 452 aaPredicted RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 C11orf71Q6IPW1 123 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 CDPF1Q6NVV7 123 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 BTNL8Q6UX41 500 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 LYPD2Q6UXB3 125 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 DEFB108BQ8NET1 73 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 HSD17B10Q99714 261 aaKnown RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 SCRT1Q9BWW7 348 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 SH3BGRL3Q9H299 93 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 SAP30LQ9HAJ7 183 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 C19orf12Q9NSK7 152 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 TMEM106BQ9NUM4 274 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 KAAG1Q9UBP8 84 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 HSPB7Q9UBY9 170 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 YLPM1P49750 1951 aaKnown RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 MED19A0JLT2 244 aaPredicted RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 ZNF729A6NN14 1252 aaPredicted RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 FAM90A26D6RGX4 464 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 I3L521 148 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 RBFOX2O43251 390 aaKnown RBP eCLIP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 NXPH3O95157 252 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 CLDN14O95500 239 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 FSTL3O95633 263 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 CLDN1O95832 211 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 OMGP23515 440 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 G6PCP35575 357 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 EDDM3BP56851 147 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 BAXQ07812 192 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 ARL16Q0P5N6 197 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 ZNF273Q14593 569 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 LTC4SQ16873 150 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 PDLIM3Q53GG5 364 aaPredicted RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 SMUG1Q53HV7 270 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 RPL39P5Q59GN2 51 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 THOC7Q6I9Y2 204 aaKnown RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 SPAG16Q8N0X2 631 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 ZNF596Q8TC21 504 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 LRRC20Q8TCA0 184 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 RNF141Q8WVD5 230 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 NINJ1Q92982 152 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 LEAP2Q969E1 77 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 SAT2Q96F10 170 aaPredicted RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 KCNJ16Q9NPI9 418 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 IDI2-AS1Q9NZ38 188 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 RPUSD1Q9UJJ7 312 aaKnown RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 RFNGQ9Y644 331 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 LINC00312Q9Y6C7 94 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 COL6A6A6NMZ7 2263 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 PPIAL4EA0A075B759 164 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 SAA2-SAA4A0A096LPE2 208 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 TRGV10A0A0A0MS01 117 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 TRAV38-1A0A0B4J264 116 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 A0A1W2PPR1 153 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 RAB19A4D1S5 217 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 LRRC30A6NM36 301 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 PMS2P5A8MQ11 134 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 B8ZZF3 427 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 FAM157AC9JC47 383 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 PPIAL4DF5H284 164 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 TOR1AO14656 332 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 RAB29O14966 203 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 PPIHO43447 177 aaKnown RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 SYNGR2O43760 224 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 IL6RP08887 468 aaPredicted RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 SEC11BP0C7V7 166 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 DANCRP0C864 163 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 SAA2P0DJI9 122 aaPredicted RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 PPIAL4FP0DN26 164 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 DYNLT3P51808 116 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 TAS2R30P59541 319 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 SRSF3P84103 164 aaKnown RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 MEF2CQ06413 473 aaPredicted RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 TNFRSF9Q07011 255 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 ZNF816Q0VGE8 651 aaPredicted RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 TMEM30BQ3MIR4 351 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 OR2B11Q5JQS5 317 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 PRAMEF5Q5TYX0 476 aa3.63□□□□□ -1.83
GTDC1-208ENST00000415569 SLC25A48Q6ZT89 311 aaKnown RBP3.63□□□□□ -1.83
GTDC1-208ENST00000415569 C11orf42Q8N5U0 333 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms