RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 UBE2NLQ5JXB2 153 aa12.72□□□□□ -0.37
DDR1-230ENST00000412274 ZNF383Q8NA42 475 aa12.72□□□□□ -0.37
DDR1-230ENST00000412274 OR13F1Q8NGS4 319 aa12.72□□□□□ -0.37
DDR1-230ENST00000412274 OR5H6Q8NGV6 325 aa12.72□□□□□ -0.37
DDR1-230ENST00000412274 NUDCD2Q8WVJ2 157 aa12.72□□□□□ -0.37
DDR1-230ENST00000412274 ACOT12Q8WYK0 555 aa12.72□□□□□ -0.37
DDR1-230ENST00000412274 SLC25A46Q96AG3 418 aa12.72□□□□□ -0.37
DDR1-230ENST00000412274 FUNDC2Q9BWH2 189 aa12.72□□□□□ -0.37
DDR1-230ENST00000412274 ELF5Q9UKW6 265 aaPredicted RBP12.72□□□□□ -0.37
DDR1-230ENST00000412274 TRAV41A0A0B4J266 112 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 HLA-DQB1P01920 261 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 PSMB8P28062 276 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 PPIFP30405 207 aaKnown RBP12.71□□□□□ -0.37
DDR1-230ENST00000412274 ARPC4P59998 168 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 PSG5Q15238 335 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 BEAN1Q3B7T3 259 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 PYHIN1Q6K0P9 492 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 HOGA1Q86XE5 327 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 ZNF645Q8N7E2 425 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 DRAXINQ8NBI3 349 aaPredicted RBP12.71□□□□□ -0.37
DDR1-230ENST00000412274 KLHL30-AS1Q8NEE0 82 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 BEST4Q8NFU0 473 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 MCRIP2Q9BUT9 160 aaKnown RBP12.71□□□□□ -0.37
DDR1-230ENST00000412274 FBXL15Q9H469 300 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 AUNIPQ9H7T9 357 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 PARP11Q9NR21 331 aa12.71□□□□□ -0.37
DDR1-230ENST00000412274 METTL1Q9UBP6 276 aaKnown RBP12.71□□□□□ -0.37
DDR1-230ENST00000412274 G3V4G9 280 aa12.7□□□□□ -0.38
DDR1-230ENST00000412274 ATP6V0E1O15342 81 aa12.7□□□□□ -0.38
DDR1-230ENST00000412274 SSX5O60225 188 aa12.7□□□□□ -0.38
DDR1-230ENST00000412274 IGLV1-40P01703 118 aa12.7□□□□□ -0.38
DDR1-230ENST00000412274 IGKV1-16P04430 117 aa12.7□□□□□ -0.38
DDR1-230ENST00000412274 CD40LGP29965 261 aa12.7□□□□□ -0.38
DDR1-230ENST00000412274 LSM3P62310 102 aaKnown RBP12.7□□□□□ -0.38
DDR1-230ENST00000412274 CX3CL1P78423 397 aa12.7□□□□□ -0.38
DDR1-230ENST00000412274 MSMO1Q15800 293 aa12.7□□□□□ -0.38
DDR1-230ENST00000412274 AKIRIN2Q53H80 203 aa12.7□□□□□ -0.38
DDR1-230ENST00000412274 TMEM177Q53S58 311 aa12.7□□□□□ -0.38
DDR1-230ENST00000412274 MINDY2Q8NBR6 621 aa12.7□□□□□ -0.38
DDR1-230ENST00000412274 ZMAT5Q9UDW3 170 aaKnown RBP12.7□□□□□ -0.38
DDR1-230ENST00000412274 PRELID3BQ9Y3B1 194 aa12.7□□□□□ -0.38
DDR1-230ENST00000412274 PLXNB1O43157 2135 aa12.7□□□□□ -0.38
DDR1-230ENST00000412274 IGKV1D-8A0A087WSZ0 117 aa12.69□□□□□ -0.38
DDR1-230ENST00000412274 RPLP1P05386 114 aaKnown RBP12.69□□□□□ -0.38
DDR1-230ENST00000412274 DUTP33316 252 aaKnown RBP12.69□□□□□ -0.38
DDR1-230ENST00000412274 PPP1R27Q86WC6 154 aa12.69□□□□□ -0.38
DDR1-230ENST00000412274 ANKRD13BQ86YJ7 626 aa12.69□□□□□ -0.38
DDR1-230ENST00000412274 OSR1Q8TAX0 266 aaPredicted RBP12.69□□□□□ -0.38
DDR1-230ENST00000412274 UBE2E2Q96LR5 201 aa12.69□□□□□ -0.38
DDR1-230ENST00000412274 TMEM68Q96MH6 324 aa12.69□□□□□ -0.38
DDR1-230ENST00000412274 HSD17B10Q99714 261 aaKnown RBP12.69□□□□□ -0.38
DDR1-230ENST00000412274 MRPS26Q9BYN8 205 aaKnown RBP12.69□□□□□ -0.38
DDR1-230ENST00000412274 NECAP2Q9NVZ3 263 aa12.69□□□□□ -0.38
DDR1-230ENST00000412274 SMIM31A0A1B0GVY4 71 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 SHOXO15266 292 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 WIPF1O43516 503 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 CREBL2O60519 120 aaPredicted RBP12.68□□□□□ -0.38
DDR1-230ENST00000412274 TUSC2O75896 110 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 RORCP51449 518 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 TMEM69Q5SWH9 247 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 C8orf86Q6ZUL3 223 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 SAMD12Q8N8I0 201 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 LINC00482Q8N8I6 264 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 ZBTB34Q8NCN2 500 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 OR5M8Q8NGP6 311 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 MYOZ3Q8TDC0 251 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 C4orf3Q8WVX3 66 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 AP3S1Q92572 193 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 BORCS5Q969J3 196 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 HARBI1Q96MB7 349 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 FOXA2Q9Y261 457 aaPredicted RBP12.68□□□□□ -0.38
DDR1-230ENST00000412274 MRPS7Q9Y2R9 242 aaKnown RBP12.68□□□□□ -0.38
DDR1-230ENST00000412274 NUBP2Q9Y5Y2 271 aa12.68□□□□□ -0.38
DDR1-230ENST00000412274 CCL24O00175 119 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 NFYAP23511 347 aaPredicted RBP12.67□□□□□ -0.38
DDR1-230ENST00000412274 RUNX1Q01196 453 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 VMA21Q3ZAQ7 101 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 OXLD1Q5BKU9 147 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 MZT2AQ6P582 158 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 ZNF66Q6ZN08 573 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 C1QL4Q86Z23 238 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 MRPL41Q8IXM3 137 aaKnown RBP12.67□□□□□ -0.38
DDR1-230ENST00000412274 TEX45Q8NA69 505 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 BVESQ8NE79 360 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 OR5AP2Q8NGF4 316 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 ABHD5Q8WTS1 349 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 DDB2Q92466 427 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 DPF1Q92782 380 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 P2RX4Q99571 388 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 IFT46Q9NQC8 304 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 VSIG4Q9Y279 399 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 RBMX2Q9Y388 322 aaKnown RBP12.67□□□□□ -0.38
DDR1-230ENST00000412274 WSB1Q9Y6I7 421 aa12.67□□□□□ -0.38
DDR1-230ENST00000412274 G3V318 75 aa12.66□□□□□ -0.38
DDR1-230ENST00000412274 SLC25A17O43808 307 aa12.66□□□□□ -0.38
DDR1-230ENST00000412274 APOA1P02647 267 aa12.66□□□□□ -0.38
DDR1-230ENST00000412274 TGFBR1P36897 503 aa12.66□□□□□ -0.38
DDR1-230ENST00000412274 RAB9AP51151 201 aa12.66□□□□□ -0.38
DDR1-230ENST00000412274 VBP1P61758 197 aa12.66□□□□□ -0.38
DDR1-230ENST00000412274 NCS1P62166 190 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms