RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 KIR2DS2P43631 304 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 CLEC12BQ2HXU8 276 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 TMEM65Q6PI78 240 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 LINC00311Q8N616 119 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 RNASE11Q8TAA1 199 aaKnown RBP17.19■□□□□ 0.34
TPM1-208ENST00000404484 GRPEL2Q8TAA5 225 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 LSM10Q969L4 123 aaKnown RBP17.19■□□□□ 0.34
TPM1-208ENST00000404484 PIMREGQ9BSJ6 248 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 NARFLQ9H6Q4 476 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 PRELID3BQ9Y3B1 194 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 SAA2-SAA4A0A096LPE2 208 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 IGHV2-5P01817 119 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 SAA2P0DJI9 122 aaPredicted RBP17.19■□□□□ 0.34
TPM1-208ENST00000404484 SLC25A6P12236 298 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 THBS3P49746 956 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 RPL30P62888 115 aaKnown RBP17.19■□□□□ 0.34
TPM1-208ENST00000404484 IL15RAQ13261 267 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 NMSQ5H8A3 153 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 SPAG16Q8N0X2 631 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 ZNF596Q8TC21 504 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 TNFRSF14Q92956 283 aa17.19■□□□□ 0.34
TPM1-208ENST00000404484 ZANQ9Y493 2812 aa17.18■□□□□ 0.34
TPM1-208ENST00000404484 FOSL1P15407 271 aa17.18■□□□□ 0.34
TPM1-208ENST00000404484 SMCO1Q147U7 214 aa17.18■□□□□ 0.34
TPM1-208ENST00000404484 ZNF585BQ52M93 769 aa17.18■□□□□ 0.34
TPM1-208ENST00000404484 CLEC2AQ6UVW9 174 aa17.18■□□□□ 0.34
TPM1-208ENST00000404484 OR9G1Q8NH87 305 aa17.18■□□□□ 0.34
TPM1-208ENST00000404484 RRNAD1Q96FB5 475 aaKnown RBP17.18■□□□□ 0.34
TPM1-208ENST00000404484 BPESC1Q9GZL8 116 aa17.18■□□□□ 0.34
TPM1-208ENST00000404484 TMEM133Q9H2Q1 129 aa17.18■□□□□ 0.34
TPM1-208ENST00000404484 TLN2Q9Y4G6 2542 aa17.18■□□□□ 0.34
TPM1-208ENST00000404484 A0A1W2PPE3 182 aa17.17■□□□□ 0.34
TPM1-208ENST00000404484 RBFOX2O43251 390 aaKnown RBP eCLIP17.17■□□□□ 0.34
TPM1-208ENST00000404484 RLN2P04090 185 aa17.17■□□□□ 0.34
TPM1-208ENST00000404484 LPAR6P43657 344 aa17.17■□□□□ 0.34
TPM1-208ENST00000404484 AKR1C2P52895 323 aa17.17■□□□□ 0.34
TPM1-208ENST00000404484 ERVFRD-1P60508 538 aa17.17■□□□□ 0.34
TPM1-208ENST00000404484 RPL39P5Q59GN2 51 aa17.17■□□□□ 0.34
TPM1-208ENST00000404484 LAMTOR1Q6IAA8 161 aa17.17■□□□□ 0.34
TPM1-208ENST00000404484 FAM71F2Q6NXP2 309 aa17.17■□□□□ 0.34
TPM1-208ENST00000404484 ZNF546Q86UE3 836 aa17.17■□□□□ 0.34
TPM1-208ENST00000404484 FAM168AQ92567 244 aa17.17■□□□□ 0.34
TPM1-208ENST00000404484 ZFHX3Q15911 3703 aa17.17■□□□□ 0.34
TPM1-208ENST00000404484 C22orf46C9J442 243 aa17.16■□□□□ 0.34
TPM1-208ENST00000404484 J3QR06 171 aa17.16■□□□□ 0.34
TPM1-208ENST00000404484 M0R1W7 72 aa17.16■□□□□ 0.34
TPM1-208ENST00000404484 ARPC5O15511 151 aa17.16■□□□□ 0.34
TPM1-208ENST00000404484 IL3RAP26951 378 aa17.16■□□□□ 0.34
TPM1-208ENST00000404484 UTF1Q5T230 341 aa17.16■□□□□ 0.34
TPM1-208ENST00000404484 PRSS54Q6PEW0 395 aa17.16■□□□□ 0.34
TPM1-208ENST00000404484 FAM219AQ8IW50 185 aa17.16■□□□□ 0.34
TPM1-208ENST00000404484 ODF3L1Q8IXM7 274 aa17.16■□□□□ 0.34
TPM1-208ENST00000404484 C11orf42Q8N5U0 333 aa17.16■□□□□ 0.34
TPM1-208ENST00000404484 OR10X1Q8NGY0 326 aa17.16■□□□□ 0.34
TPM1-208ENST00000404484 MBD2Q9UBB5 411 aa17.16■□□□□ 0.34
TPM1-208ENST00000404484 ONECUT1Q9UBC0 465 aa17.16■□□□□ 0.34
TPM1-208ENST00000404484 A0A1B0GU03 582 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 LINC00473A8K010 186 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 L7N2F9 121 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 TOR1AO14656 332 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 PROP1O75360 226 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 DSCR9P59020 149 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 S100A10P60903 97 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 RAB32Q13637 225 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 LGALSLQ3ZCW2 172 aaPredicted RBP17.15■□□□□ 0.34
TPM1-208ENST00000404484 ABHD12Q8N2K0 398 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 ZNF251Q9BRH9 671 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 A8MXK9 166 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 ENSAO43768 121 aaKnown RBP17.15■□□□□ 0.34
TPM1-208ENST00000404484 IGKV1-39P01597 117 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 IGKV1D-39P04432 117 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 LYL1P12980 280 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 PRRX1P54821 245 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 OR2B11Q5JQS5 317 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 NCR3LG1Q68D85 454 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 ZNF833PQ6ZTB9 187 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 KIR3DL3Q8N743 410 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 INO80EQ8NBZ0 244 aaPredicted RBP17.15■□□□□ 0.34
TPM1-208ENST00000404484 OR4D5Q8NGN0 318 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 TMEM186Q96B77 213 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 SMR3AQ99954 134 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 GSX1Q9H4S2 264 aaPredicted RBP17.15■□□□□ 0.34
TPM1-208ENST00000404484 PLEKHA2Q9HB19 425 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 PLSCR3Q9NRY6 295 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 BOLA1Q9Y3E2 137 aa17.15■□□□□ 0.34
TPM1-208ENST00000404484 SETD2Q9BYW2 2564 aaPredicted RBP17.14■□□□□ 0.33
TPM1-208ENST00000404484 SMAD7O15105 426 aaKnown RBP17.14■□□□□ 0.33
TPM1-208ENST00000404484 RAMP3O60896 148 aa17.14■□□□□ 0.33
TPM1-208ENST00000404484 NUP62P37198 522 aaPredicted RBP17.14■□□□□ 0.33
TPM1-208ENST00000404484 TAGLNQ01995 201 aaKnown RBP17.14■□□□□ 0.33
TPM1-208ENST00000404484 ZNF816Q0VGE8 651 aaPredicted RBP17.14■□□□□ 0.33
TPM1-208ENST00000404484 OR4S2Q8NH73 311 aa17.14■□□□□ 0.33
TPM1-208ENST00000404484 CLDND2Q8NHS1 167 aa17.14■□□□□ 0.33
TPM1-208ENST00000404484 C10orf105Q8TEF2 133 aa17.14■□□□□ 0.33
TPM1-208ENST00000404484 DCUN1D4Q92564 292 aa17.14■□□□□ 0.33
TPM1-208ENST00000404484 CLEC7AQ9BXN2 247 aa17.14■□□□□ 0.33
TPM1-208ENST00000404484 MFFQ9GZY8 342 aa17.14■□□□□ 0.33
TPM1-208ENST00000404484 TNFSF18Q9UNG2 199 aa17.14■□□□□ 0.33
TPM1-208ENST00000404484 MMP24Q9Y5R2 645 aa17.14■□□□□ 0.33
TPM1-208ENST00000404484 ST8SIA3O43173 380 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms