RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CA2P00918 260 aa11.91□□□□□ -0.5
TPM1-207ENST00000403994 APOA2P02652 100 aa11.91□□□□□ -0.5
TPM1-207ENST00000403994 RAB3BP20337 219 aa11.91□□□□□ -0.5
TPM1-207ENST00000403994 RAB6AP20340 208 aa11.91□□□□□ -0.5
TPM1-207ENST00000403994 GADD45AP24522 165 aa11.91□□□□□ -0.5
TPM1-207ENST00000403994 ZNF260Q3ZCT1 412 aa11.91□□□□□ -0.5
TPM1-207ENST00000403994 IGSF11Q5DX21 431 aa11.91□□□□□ -0.5
TPM1-207ENST00000403994 VAX1Q5SQQ9 334 aa11.91□□□□□ -0.5
TPM1-207ENST00000403994 C22orf42Q6IC83 251 aa11.91□□□□□ -0.5
TPM1-207ENST00000403994 C5orf30Q96GV9 206 aa11.91□□□□□ -0.5
TPM1-207ENST00000403994 CLCC1Q96S66 551 aa11.91□□□□□ -0.5
TPM1-207ENST00000403994 TSNAXQ99598 290 aaKnown RBP11.91□□□□□ -0.5
TPM1-207ENST00000403994 FAM103A1Q9BTL3 118 aaKnown RBP11.91□□□□□ -0.5
TPM1-207ENST00000403994 TRBV6-7A0A0A0MS04 114 aa11.9□□□□□ -0.5
TPM1-207ENST00000403994 LGALS1P09382 135 aaKnown RBP11.9□□□□□ -0.5
TPM1-207ENST00000403994 GALP22466 123 aa11.9□□□□□ -0.5
TPM1-207ENST00000403994 ECI1P42126 302 aa11.9□□□□□ -0.5
TPM1-207ENST00000403994 ACTBL2Q562R1 376 aa11.9□□□□□ -0.5
TPM1-207ENST00000403994 UBE2UQ5VVX9 321 aa11.9□□□□□ -0.5
TPM1-207ENST00000403994 PYHIN1Q6K0P9 492 aa11.9□□□□□ -0.5
TPM1-207ENST00000403994 PPP1R27Q86WC6 154 aa11.9□□□□□ -0.5
TPM1-207ENST00000403994 OR10J5Q8NHC4 309 aa11.9□□□□□ -0.5
TPM1-207ENST00000403994 ARPC1AQ92747 370 aa11.9□□□□□ -0.5
TPM1-207ENST00000403994 ZNF230Q9UIE0 474 aaPredicted RBP11.9□□□□□ -0.5
TPM1-207ENST00000403994 NUBP2Q9Y5Y2 271 aa11.9□□□□□ -0.5
TPM1-207ENST00000403994 SORL1Q92673 2214 aa11.9□□□□□ -0.51
TPM1-207ENST00000403994 SMIM30A4D0T7 59 aa11.89□□□□□ -0.51
TPM1-207ENST00000403994 SLC25A17O43808 307 aa11.89□□□□□ -0.51
TPM1-207ENST00000403994 MRPS14O60783 128 aaKnown RBP11.89□□□□□ -0.51
TPM1-207ENST00000403994 ATP6V1G2O95670 118 aa11.89□□□□□ -0.51
TPM1-207ENST00000403994 GSTT2P0CG29 244 aa11.89□□□□□ -0.51
TPM1-207ENST00000403994 GSTT2BP0CG30 244 aa11.89□□□□□ -0.51
TPM1-207ENST00000403994 PSMB9P28065 219 aa11.89□□□□□ -0.51
TPM1-207ENST00000403994 RPS16P62249 146 aaKnown RBP11.89□□□□□ -0.51
TPM1-207ENST00000403994 SSBP2P81877 361 aaPredicted RBP11.89□□□□□ -0.51
TPM1-207ENST00000403994 TMEM267Q0VDI3 215 aaPredicted RBP11.89□□□□□ -0.51
TPM1-207ENST00000403994 UNQ5815/PRO19632Q6UWF5 114 aa11.89□□□□□ -0.51
TPM1-207ENST00000403994 ZNF562Q6V9R5 426 aa11.89□□□□□ -0.51
TPM1-207ENST00000403994 GRPEL2Q8TAA5 225 aa11.89□□□□□ -0.51
TPM1-207ENST00000403994 SLC35D1Q9NTN3 355 aa11.89□□□□□ -0.51
TPM1-207ENST00000403994 SDHAF2Q9NX18 166 aa11.89□□□□□ -0.51
TPM1-207ENST00000403994 ZNF256Q9Y2P7 627 aaPredicted RBP11.89□□□□□ -0.51
TPM1-207ENST00000403994 LSM4Q9Y4Z0 139 aaKnown RBP11.89□□□□□ -0.51
TPM1-207ENST00000403994 IGHV4OR15-8A0A075B7B6 117 aa11.88□□□□□ -0.51
TPM1-207ENST00000403994 A0A087WW49 117 aa11.88□□□□□ -0.51
TPM1-207ENST00000403994 IGLV2-23P01705 113 aa11.88□□□□□ -0.51
TPM1-207ENST00000403994 OR8U9P0C7N5 309 aa11.88□□□□□ -0.51
TPM1-207ENST00000403994 INSL3P51460 131 aa11.88□□□□□ -0.51
TPM1-207ENST00000403994 SLURP1P55000 103 aa11.88□□□□□ -0.51
TPM1-207ENST00000403994 AKIRIN2Q53H80 203 aa11.88□□□□□ -0.51
TPM1-207ENST00000403994 LFNGQ8NES3 379 aa11.88□□□□□ -0.51
TPM1-207ENST00000403994 DCUN1D4Q92564 292 aa11.88□□□□□ -0.51
TPM1-207ENST00000403994 FLYWCH2Q96CP2 140 aaKnown RBP11.88□□□□□ -0.51
TPM1-207ENST00000403994 HARBI1Q96MB7 349 aa11.88□□□□□ -0.51
TPM1-207ENST00000403994 DNAH7Q8WXX0 4024 aa11.88□□□□□ -0.51
TPM1-207ENST00000403994 IGKV1D-8A0A087WSZ0 117 aa11.87□□□□□ -0.51
TPM1-207ENST00000403994 METTL21EPA6NDL7 271 aa11.87□□□□□ -0.51
TPM1-207ENST00000403994 LINC01619G3V211 115 aa11.87□□□□□ -0.51
TPM1-207ENST00000403994 OVOL1O14753 267 aa11.87□□□□□ -0.51
TPM1-207ENST00000403994 ARPC1BO15143 372 aaKnown RBP11.87□□□□□ -0.51
TPM1-207ENST00000403994 TPPP2P59282 170 aa11.87□□□□□ -0.51
TPM1-207ENST00000403994 ARFRP1Q13795 201 aa11.87□□□□□ -0.51
TPM1-207ENST00000403994 Q6ZS49 121 aa11.87□□□□□ -0.51
TPM1-207ENST00000403994 SPARTQ8N0X7 666 aa11.87□□□□□ -0.51
TPM1-207ENST00000403994 FCGR1BQ92637 280 aa11.87□□□□□ -0.51
TPM1-207ENST00000403994 DLX4Q92988 240 aaPredicted RBP11.87□□□□□ -0.51
TPM1-207ENST00000403994 GINS4Q9BRT9 223 aa11.87□□□□□ -0.51
TPM1-207ENST00000403994 TXNL4BQ9NX01 149 aaKnown RBP11.87□□□□□ -0.51
TPM1-207ENST00000403994 ELF5Q9UKW6 265 aaPredicted RBP11.87□□□□□ -0.51
TPM1-207ENST00000403994 TNCP24821 2201 aa11.86□□□□□ -0.51
TPM1-207ENST00000403994 NOTOA8MTQ0 251 aa11.86□□□□□ -0.51
TPM1-207ENST00000403994 IGHV3-11P01762 117 aa11.86□□□□□ -0.51
TPM1-207ENST00000403994 DTYMKP23919 212 aa11.86□□□□□ -0.51
TPM1-207ENST00000403994 FGF9P31371 208 aaPredicted RBP11.86□□□□□ -0.51
TPM1-207ENST00000403994 PJVKQ0ZLH3 352 aa11.86□□□□□ -0.51
TPM1-207ENST00000403994 FXYD3Q14802 87 aa11.86□□□□□ -0.51
TPM1-207ENST00000403994 SRSF7Q16629 238 aaKnown RBP eCLIP11.86□□□□□ -0.51
TPM1-207ENST00000403994 ZNF429Q86V71 674 aa11.86□□□□□ -0.51
TPM1-207ENST00000403994 H1FOOQ8IZA3 346 aaPredicted RBP11.86□□□□□ -0.51
TPM1-207ENST00000403994 MS4A10Q96PG2 267 aa11.86□□□□□ -0.51
TPM1-207ENST00000403994 ATG5Q9H1Y0 275 aa11.86□□□□□ -0.51
TPM1-207ENST00000403994 SLA2Q9H6Q3 261 aa11.86□□□□□ -0.51
TPM1-207ENST00000403994 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.86□□□□□ -0.51
TPM1-207ENST00000403994 STUB1Q9UNE7 303 aa11.86□□□□□ -0.51
TPM1-207ENST00000403994 HUWE1Q7Z6Z7 4374 aaKnown RBP11.86□□□□□ -0.51
TPM1-207ENST00000403994 SAP30O75446 220 aa11.85□□□□□ -0.51
TPM1-207ENST00000403994 LY86O95711 162 aa11.85□□□□□ -0.51
TPM1-207ENST00000403994 TRGV3P03979 118 aa11.85□□□□□ -0.51
TPM1-207ENST00000403994 CRYGBP07316 175 aa11.85□□□□□ -0.51
TPM1-207ENST00000403994 TALDO1P37837 337 aa11.85□□□□□ -0.51
TPM1-207ENST00000403994 CBX3Q13185 183 aa11.85□□□□□ -0.51
TPM1-207ENST00000403994 RTL8BQ17RB0 113 aa11.85□□□□□ -0.51
TPM1-207ENST00000403994 TMEM177Q53S58 311 aa11.85□□□□□ -0.51
TPM1-207ENST00000403994 POC5Q8NA72 575 aa11.85□□□□□ -0.51
TPM1-207ENST00000403994 DDB2Q92466 427 aa11.85□□□□□ -0.51
TPM1-207ENST00000403994 Q9H521 79 aa11.85□□□□□ -0.51
TPM1-207ENST00000403994 H3BUA1 57 aa11.84□□□□□ -0.51
TPM1-207ENST00000403994 CD40LGP29965 261 aa11.84□□□□□ -0.51
TPM1-207ENST00000403994 LGALS7P47929 136 aa11.84□□□□□ -0.51
TPM1-207ENST00000403994 TAGLNQ01995 201 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms