RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 IGLV2-14P01704 120 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 HLA-DQB1P01920 261 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 IGF1P05019 195 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 ELK1P19419 428 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 LUMP51884 338 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 PSG5Q15238 335 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 PDPNQ86YL7 162 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 OR4F17Q8NGA8 305 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 FLYWCH2Q96CP2 140 aaKnown RBP11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 OR4F4Q96R69 305 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 CLCC1Q96S66 551 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 OR51J1Q9H342 316 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 PARP11Q9NR21 331 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 MRPS7Q9Y2R9 242 aaKnown RBP11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 FBXO7Q9Y3I1 522 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 WSB1Q9Y6I7 421 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 TUSC2O75896 110 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 APOA1P02647 267 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 DUTP33316 252 aaKnown RBP11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 CX3CL1P78423 397 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 NDPQ00604 133 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 CFHR3Q02985 330 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 SPCS2Q15005 226 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 TEX38Q6PEX7 206 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 C1QL4Q86Z23 238 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 CLVS1Q8IUQ0 354 aaPredicted RBP11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 ZNF645Q8N7E2 425 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 BVESQ8NE79 360 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 ACOT12Q8WYK0 555 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 RNF5Q99942 180 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 GON7Q9BXV9 100 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 TPSG1Q9NRR2 321 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 METTL1Q9UBP6 276 aaKnown RBP11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 NOTCH3Q9UM47 2321 aa11.05□□□□□ -0.64
HLA-DQB1-202ENST00000399079 SLC25A17O43808 307 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 IGLV2-23P01705 113 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 RPLP1P05386 114 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 PF4V1P10720 104 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 VDAC1P21796 283 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 AADACP22760 399 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 FCGR2CP31995 323 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 CBX5P45973 191 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 THBS3P49746 956 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 RPL23AP62750 156 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 OR5AP2Q8NGF4 316 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 DDB2Q92466 427 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 IFT46Q9NQC8 304 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 NECAP2Q9NVZ3 263 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 SMIM31A0A1B0GVY4 71 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 SRRM4A7MD48 611 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 OR5H8P0DN80 308 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 ZNF182P17025 639 aaPredicted RBP11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 PRSS3P35030 304 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 RFX2P48378 723 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 RPL30P62888 115 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 SNX29P2Q8IUI4 249 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 COMMD1Q8N668 190 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 HARBI1Q96MB7 349 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 CMTM3Q96MX0 182 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 GPHA2Q96T91 129 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 TSNAXQ99598 290 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 FAM103A1Q9BTL3 118 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 RBMX2Q9Y388 322 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 A3GALT2U3KPV4 340 aa11.04□□□□□ -0.64
HLA-DQB1-202ENST00000399079 FAM25AB3EWG3 89 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 FAM25CB3EWG5 89 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 FAM25GB3EWG6 89 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 G3V4G9 280 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 SHOXO15266 292 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 CRYZL1O95825 349 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 CA2P00918 260 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 PPYP01298 95 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 IGHG4P01861 327 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 EGR2P11161 476 aaPredicted RBP11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 PPIFP30405 207 aaKnown RBP11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 RPL5P46777 297 aaKnown RBP11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 PJVKQ0ZLH3 352 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 RTL8BQ17RB0 113 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 TMEM177Q53S58 311 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 OR2B11Q5JQS5 317 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 MZT2AQ6P582 158 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 C8orf86Q6ZUL3 223 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 SECTM1Q8WVN6 248 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 KLK15Q9H2R5 256 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 CCL28Q9NRJ3 127 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 ZNF580Q9UK33 172 aa11.03□□□□□ -0.64
HLA-DQB1-202ENST00000399079 TRAV41A0A0B4J266 112 aa11.02□□□□□ -0.65
HLA-DQB1-202ENST00000399079 NUDT19A8MXV4 375 aa11.02□□□□□ -0.65
HLA-DQB1-202ENST00000399079 SPDEFO95238 335 aa11.02□□□□□ -0.65
HLA-DQB1-202ENST00000399079 PMP2P02689 132 aa11.02□□□□□ -0.65
HLA-DQB1-202ENST00000399079 PF4P02776 101 aa11.02□□□□□ -0.65
HLA-DQB1-202ENST00000399079 PSMB8P28062 276 aa11.02□□□□□ -0.65
HLA-DQB1-202ENST00000399079 FXYD4P59646 89 aa11.02□□□□□ -0.65
HLA-DQB1-202ENST00000399079 DEFA6Q01524 100 aa11.02□□□□□ -0.65
HLA-DQB1-202ENST00000399079 TAGLNQ01995 201 aaKnown RBP11.02□□□□□ -0.65
HLA-DQB1-202ENST00000399079 FOXE3Q13461 319 aa11.02□□□□□ -0.65
HLA-DQB1-202ENST00000399079 CDK10Q15131 360 aa11.02□□□□□ -0.65
HLA-DQB1-202ENST00000399079 ECSCRQ19T08 205 aa11.02□□□□□ -0.65
HLA-DQB1-202ENST00000399079 CXorf66Q5JRM2 361 aaPredicted RBP11.02□□□□□ -0.65
HLA-DQB1-202ENST00000399079 ZNF660Q6AZW8 331 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms