RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 NEIL1Q96FI4 390 aaPredicted RBP11.19□□□□□ -0.62
TRIM40-207ENST00000396581 OR4F4Q96R69 305 aa11.19□□□□□ -0.62
TRIM40-207ENST00000396581 IMMP2LQ96T52 175 aa11.19□□□□□ -0.62
TRIM40-207ENST00000396581 FUT9Q9Y231 359 aa11.19□□□□□ -0.62
TRIM40-207ENST00000396581 WDR1O75083 606 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 COX5AP20674 150 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 TUBG1P23258 451 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 NPPCP23582 126 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 IDH3GP51553 393 aaPredicted RBP11.18□□□□□ -0.62
TRIM40-207ENST00000396581 SOX8P57073 446 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 RPL15P61313 204 aaKnown RBP11.18□□□□□ -0.62
TRIM40-207ENST00000396581 NUTF2P61970 127 aaKnown RBP11.18□□□□□ -0.62
TRIM40-207ENST00000396581 ZNF146Q15072 292 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 MSMO1Q15800 293 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 TMEM144Q7Z5S9 345 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 GBGT1Q8N5D6 347 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 ZNF645Q8N7E2 425 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 GATAD1Q8WUU5 269 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 BTF3L4Q96K17 158 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 NPCDR1Q9BY65 106 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 GP6Q9HCN6 339 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 TRAPPC2LQ9UL33 140 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 KCNS2Q9ULS6 477 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 BOKQ9UMX3 212 aaPredicted RBP11.18□□□□□ -0.62
TRIM40-207ENST00000396581 ASPMQ8IZT6 3477 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 C3orf80F5H4A9 247 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 SNRPCP09234 159 aaKnown RBP11.18□□□□□ -0.62
TRIM40-207ENST00000396581 ZNF16P17020 682 aaPredicted RBP11.18□□□□□ -0.62
TRIM40-207ENST00000396581 PLA2G5P39877 138 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 IQCJQ1A5X6 159 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 FFAR4Q5NUL3 377 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 LURAP1Q96LR2 239 aa11.18□□□□□ -0.62
TRIM40-207ENST00000396581 RBM7Q9Y580 266 aaKnown RBP11.18□□□□□ -0.62
TRIM40-207ENST00000396581 PTPRBP23467 1997 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 TRAV39A0A0B4J263 110 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 ODAMA1E959 279 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 HMGB3O15347 200 aaKnown RBP11.17□□□□□ -0.62
TRIM40-207ENST00000396581 SYNGR4O95473 234 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 CNN1P51911 297 aaKnown RBP11.17□□□□□ -0.62
TRIM40-207ENST00000396581 GNB2P62879 340 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 PLP2Q04941 152 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 OR1C1Q15619 314 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 KCNIP4Q6PIL6 250 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 WDR86Q86TI4 376 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 Q8N7P7 452 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 OR10P1Q8NGE3 313 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 TMEM37Q8WXS4 190 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 RAB1CQ92928 201 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 FAM173AQ9BQD7 235 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 ZNF703Q9H7S9 590 aaPredicted RBP11.17□□□□□ -0.62
TRIM40-207ENST00000396581 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.17□□□□□ -0.62
TRIM40-207ENST00000396581 KIAA2026Q5HYC2 2103 aa11.17□□□□□ -0.62
TRIM40-207ENST00000396581 PAGE4O60829 102 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 ATP1A1-AS1Q5TC04 95 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 LINC01551Q86U37 167 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 TGIF2LXQ8IUE1 241 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 TCTEX1D1Q8N7M0 179 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 OR2M7Q8NG81 312 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 C5orf30Q96GV9 206 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 CIB3Q96Q77 187 aaPredicted RBP11.16□□□□□ -0.62
TRIM40-207ENST00000396581 ZNF705GA8MUZ8 300 aaPredicted RBP11.16□□□□□ -0.62
TRIM40-207ENST00000396581 RAB29O14966 203 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 RAMP3O60896 148 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 CA6P23280 308 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 IL3RAP26951 378 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 BRWD1-AS2P59051 145 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 PAX5Q02548 391 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 TFF3Q07654 80 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 FOXL1Q12952 345 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 FAM180AQ6UWF9 173 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 LINC00696Q6ZRV3 163 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 ASCL5Q7RTU5 278 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 PRR18Q8N4B5 295 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 OR1L1Q8NH94 360 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 APH1AQ96BI3 265 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 POLDIP2Q9Y2S7 368 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 PXMP4Q9Y6I8 212 aa11.16□□□□□ -0.62
TRIM40-207ENST00000396581 KIR2DL5BA0A0G2JN68 375 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 KIR2DL5BA0A0G2JPC4 375 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 C1QTNF9BB2RNN3 333 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 C11orf94C9JXX5 98 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 J3QW42 95 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 SIRPB1O00241 398 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 PDE6DO43924 150 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 SOX15O60248 233 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 RPL30P62888 115 aaKnown RBP11.15□□□□□ -0.62
TRIM40-207ENST00000396581 HNF4GQ14541 408 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 KIR2DL5AQ8N109 375 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 DTD1Q8TEA8 209 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 RTL8AQ9BWD3 113 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 PLA2G3Q9NZ20 509 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 CLN8Q9UBY8 286 aa11.15□□□□□ -0.62
TRIM40-207ENST00000396581 C17orf112F2Z3M2 114 aa11.15□□□□□ -0.63
TRIM40-207ENST00000396581 EREGO14944 169 aa11.15□□□□□ -0.63
TRIM40-207ENST00000396581 TCAPO15273 167 aa11.15□□□□□ -0.63
TRIM40-207ENST00000396581 ZG16O60844 167 aa11.15□□□□□ -0.63
TRIM40-207ENST00000396581 OR4A8P0C604 315 aa11.15□□□□□ -0.63
TRIM40-207ENST00000396581 G6PCP35575 357 aa11.15□□□□□ -0.63
TRIM40-207ENST00000396581 PRSS8Q16651 343 aa11.15□□□□□ -0.63
TRIM40-207ENST00000396581 C1orf194Q5T5A4 169 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms