RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ITSN1Q15811 1721 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 ALKQ9UM73 1620 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 SETBP1Q9Y6X0 1596 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 A0A087WX48 190 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 TRAV8-1A0A0A6YYK1 113 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 KRBOX1C9JBD0 128 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 H7C1C5 153 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 LGALS9O00182 355 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 SLC37A4O43826 429 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 COX7A2P2O60397 106 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 LMX1BO60663 402 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 PFDN1O60925 122 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 SRSF10O75494 262 aaKnown RBP3.62□□□□□ -1.83
GABPB1-204ENST00000396464 IGLV2-8P01709 118 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 LGALS1P09382 135 aaKnown RBP3.62□□□□□ -1.83
GABPB1-204ENST00000396464 FBP1P09467 338 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 OR12D1P0DN82 309 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 SDC4P31431 198 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 HSPA9P38646 679 aaKnown RBP3.62□□□□□ -1.83
GABPB1-204ENST00000396464 PSMD8P48556 350 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 PSMB3P49720 205 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 MEOX2P50222 304 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 LCN6P62502 163 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 BTN1A1Q13410 526 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 ZNF239Q16600 458 aaKnown RBP3.62□□□□□ -1.83
GABPB1-204ENST00000396464 ZFP69Q49AA0 526 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 TCF24Q7RTU0 167 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 MDP1Q86V88 176 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 ZNF584Q8IVC4 421 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 ANKRD29Q8N6D5 301 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 ZNF645Q8N7E2 425 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 YIPF7Q8N8F6 280 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 GDPD1Q8N9F7 314 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 OR9Q1Q8NGQ5 310 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 OR1J4Q8NGS1 313 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 FAM104AQ969W3 186 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 APOBEC3DQ96AK3 386 aaPredicted RBP3.62□□□□□ -1.83
GABPB1-204ENST00000396464 REEP6Q96HR9 211 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 CAPZA3Q96KX2 299 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 PGLYRP2Q96PD5 576 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 KLF6Q99612 283 aaPredicted RBP3.62□□□□□ -1.83
GABPB1-204ENST00000396464 HSPB9Q9BQS6 159 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 LRRC61Q9BV99 259 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 PBDC1Q9BVG4 233 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 TMEM147Q9BVK8 224 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 HEXA-AS1Q9H8Q6 139 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 PRTFDC1Q9NRG1 225 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 PCYT1BQ9Y5K3 369 aaPredicted RBP3.62□□□□□ -1.83
GABPB1-204ENST00000396464 ZNF706Q9Y5V0 76 aaPredicted RBP3.62□□□□□ -1.83
GABPB1-204ENST00000396464 PTPRJQ12913 1337 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 NRXN3Q9Y4C0 1643 aa3.62□□□□□ -1.83
GABPB1-204ENST00000396464 IGLV7-46A0A075B6I9 117 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 IGKV6D-21A0A0A0MT36 114 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 TRAV19A0A0A6YYK7 116 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 IGHV3-74A0A0B4J1X5 117 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 A0A1B0GUV1 79 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 ARL5CA6NH57 179 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 F5H5P2 479 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.61□□□□□ -1.83
GABPB1-204ENST00000396464 MRASO14807 208 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 DEGS1O15121 323 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 LINC01565O15544 149 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 CHST10O43529 356 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 PIAS1O75925 651 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 GABARAPO95166 117 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 HLA-DRB1P01911 266 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 C1QCP02747 245 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 HLA-DPB1P04440 258 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 SOD3P08294 240 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 CTSEP14091 401 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 CA5AP35218 305 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 DNAJB13P59910 316 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 HERVK_113P63121 156 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 BAMBIQ13145 260 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 WHAMMP3Q1A5X7 153 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 RSPO1Q2MKA7 263 aaPredicted RBP3.61□□□□□ -1.83
GABPB1-204ENST00000396464 PLPPR5Q32ZL2 321 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 RNF212Q495C1 297 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 OR2T27Q8NH04 317 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 OR51H1Q8NH63 302 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 ZNF675Q8TD23 568 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 ORAOV1Q8WV07 137 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 GTSF1Q8WW33 167 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 DNAJC9Q8WXX5 260 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 EXOSC8Q96B26 276 aaKnown RBP3.61□□□□□ -1.83
GABPB1-204ENST00000396464 YPEL4Q96NS1 127 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 CCDC115Q96NT0 180 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 F2RL3Q96RI0 385 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 HSD17B10Q99714 261 aaKnown RBP3.61□□□□□ -1.83
GABPB1-204ENST00000396464 PLEKHF2Q9H8W4 249 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 SETD1AO15047 1707 aaKnown RBP3.61□□□□□ -1.83
GABPB1-204ENST00000396464 NALCNQ8IZF0 1738 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 SIGLEC16A6NMB1 481 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 EPM2AB3EWF7 344 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 C4orf51C9J302 202 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 BMPR1BO00238 502 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 DLEU1O43261 78 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 HTR1AP08908 422 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 SCGB1C2P0DMR2 95 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 S100PP25815 95 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms