RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 ACSM6Q6P461 480 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 NRN1Q9NPD7 142 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 A0A0J9YW62 118 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 C1QTNF9BB2RNN3 333 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 CFIP05156 583 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 HINT1P49773 126 aaPredicted RBP15.95■□□□□ 0.14
HOXC6-202ENST00000394331 PRRX1P54821 245 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 MLF1P58340 268 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 SLC25A22Q9H936 323 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 TBL2Q9Y4P3 447 aaKnown RBP15.95■□□□□ 0.14
HOXC6-202ENST00000394331 PRUNE2Q8WUY3 3088 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 G3V3Y1 287 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 SPRY1O43609 319 aaPredicted RBP15.95■□□□□ 0.14
HOXC6-202ENST00000394331 F2RP25116 425 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 DUSP3P51452 185 aaPredicted RBP15.95■□□□□ 0.14
HOXC6-202ENST00000394331 ARF6P62330 175 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 LRRC10Q5BKY1 277 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 TMPRSS7Q7RTY8 843 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 DTX1Q86Y01 620 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 GATAD1Q8WUU5 269 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 KCNIP2Q9NS61 270 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 LAMA1P25391 3075 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 TNFSF11O14788 317 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 PIGYQ3MUY2 71 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 LDLRAD2Q5SZI1 272 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 MYO7BQ6PIF6 2116 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 OR10G9Q8NGN4 311 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 OR10G7Q8NGN6 311 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 KCNS1Q96KK3 526 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 CLN8Q9UBY8 286 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 USP34Q70CQ2 3546 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 IGKV1-27A0A075B6S5 117 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 KITLGP21583 273 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 CBLN1P23435 193 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 PMCHL1Q16048 86 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 C19orf35Q6ZS72 473 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 MUC15Q8N387 334 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 SGCZQ96LD1 299 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 UHRF2Q96PU4 802 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 TXNDC17Q9BRA2 123 aa15.94■□□□□ 0.14
HOXC6-202ENST00000394331 A0A1W2PRS3 328 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 K7ERU9 68 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 NTN3O00634 580 aaPredicted RBP15.93■□□□□ 0.14
HOXC6-202ENST00000394331 PGLYRP1O75594 196 aaPredicted RBP15.93■□□□□ 0.14
HOXC6-202ENST00000394331 C1QTNF9P0C862 333 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 CCL4P13236 92 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 S100GP29377 79 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 APOBEC3AP31941 199 aaPredicted RBP15.93■□□□□ 0.14
HOXC6-202ENST00000394331 RAC3P60763 192 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 GNB1P62873 340 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 SLC38A11Q08AI6 406 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 MAJINQ3KP22 176 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 FAM180AQ6UWF9 173 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 OR10V1Q8NGI7 309 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 LRFN3Q9BTN0 628 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 UBE2L5PA0A1B0GUS4 154 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 C17orf112F2Z3M2 114 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 CTXN2P0C2S0 81 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 IL36BQ9NZH7 164 aa15.93■□□□□ 0.14
HOXC6-202ENST00000394331 NBEAP1P0C6P0 100 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 COX5AP20674 150 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 TIMP3P35625 211 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 FOLR3P41439 243 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 MED12Q93074 2177 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 IGKV1D-13A0A0B4J2D9 117 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 DPRXA6NFQ7 191 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 IGKV1-13P0DP09 117 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 CRYGSP22914 178 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 RBM11P57052 281 aaKnown RBP15.92■□□□□ 0.14
HOXC6-202ENST00000394331 SNAI3Q3KNW1 292 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 BRICD5Q6PL45 260 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 Q6ZVH6 145 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 UBALD2Q8IYN6 164 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 GNB1LQ9BYB4 327 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 SRXN1Q9BYN0 137 aa15.92■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A10PA6NDY2 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A18PA6NE21 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A16PA6NEW6 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A20PA6NIJ5 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A8PA6NJQ4 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A7PA6NKC0 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A22PA8MWA6 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A12PA8MX19 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A5PA8MXJ8 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A23PA8MXZ1 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 SH2D1BO14796 132 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 RBFOX2O43251 390 aaKnown RBP eCLIP15.91■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A15PP0C7V4 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A13PP0C7W8 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A14PP0C7W9 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 FAM90A24PP0C7X0 464 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 SRD5A2P31213 254 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 VAMP3Q15836 100 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 OR4F17Q8NGA8 305 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 PI4KAP42356 2102 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 IGKV1-12A0A0C4DH73 117 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 IGKV1D-12P01611 117 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 MT-ND6P03923 174 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 CLDN18P56856 261 aa15.91■□□□□ 0.14
HOXC6-202ENST00000394331 ARG2P78540 354 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms