RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 C1QL4Q86Z23 238 aa9.28□□□□□ -0.92
RFC4-202ENST00000392481 SAMD12Q8N8I0 201 aa9.28□□□□□ -0.92
RFC4-202ENST00000392481 C5orf30Q96GV9 206 aa9.28□□□□□ -0.92
RFC4-202ENST00000392481 ADTRPQ96IZ2 230 aa9.28□□□□□ -0.92
RFC4-202ENST00000392481 PARP11Q9NR21 331 aa9.28□□□□□ -0.92
RFC4-202ENST00000392481 SLC35D1Q9NTN3 355 aa9.28□□□□□ -0.92
RFC4-202ENST00000392481 METTL1Q9UBP6 276 aaKnown RBP9.28□□□□□ -0.92
RFC4-202ENST00000392481 NUDT19A8MXV4 375 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 FCN1O00602 326 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 ATP6V0E1O15342 81 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 WIPF1O43516 503 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 SLC22A5O76082 557 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 HLA-DQB1P01920 261 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 RPLP1P05386 114 aaKnown RBP9.27□□□□□ -0.93
RFC4-202ENST00000392481 RRASP10301 218 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 CD33P20138 364 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 NFYAP23511 347 aaPredicted RBP9.27□□□□□ -0.93
RFC4-202ENST00000392481 PSMB8P28062 276 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 PPIFP30405 207 aaKnown RBP9.27□□□□□ -0.93
RFC4-202ENST00000392481 CBX5P45973 191 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 LGALS7P47929 136 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 LUMP51884 338 aaPredicted RBP9.27□□□□□ -0.93
RFC4-202ENST00000392481 VBP1P61758 197 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 CX3CL1P78423 397 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 RTL8BQ17RB0 113 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 BEAN1Q3B7T3 259 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 KPRPQ5T749 579 aaPredicted RBP9.27□□□□□ -0.93
RFC4-202ENST00000392481 HOGA1Q86XE5 327 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 ANKRD13BQ86YJ7 626 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 ZNF695Q8IW36 515 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 KLHL30-AS1Q8NEE0 82 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 BEST4Q8NFU0 473 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 WSB1Q9Y6I7 421 aa9.27□□□□□ -0.93
RFC4-202ENST00000392481 TNCP24821 2201 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 TRAV41A0A0B4J266 112 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 G3V318 75 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 TUSC2O75896 110 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 DUTP33316 252 aaKnown RBP9.26□□□□□ -0.93
RFC4-202ENST00000392481 CDX1P47902 265 aaPredicted RBP9.26□□□□□ -0.93
RFC4-202ENST00000392481 CRIP2P52943 208 aaPredicted RBP9.26□□□□□ -0.93
RFC4-202ENST00000392481 ARPC4P59998 168 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 NDPQ00604 133 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 CBX3Q13185 183 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 TMEM177Q53S58 311 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 OXLD1Q5BKU9 147 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 TMEM69Q5SWH9 247 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 ZNF562Q6V9R5 426 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 ETV3LQ6ZN32 361 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 LCNL1Q6ZST4 164 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 C18orf65Q6ZTR6 163 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 C8orf86Q6ZUL3 223 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 ZNF645Q8N7E2 425 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 GVQW1Q8N7I0 195 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 MINDY2Q8NBR6 621 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 DDB2Q92466 427 aa9.26□□□□□ -0.93
RFC4-202ENST00000392481 MRPS26Q9BYN8 205 aaKnown RBP9.26□□□□□ -0.93
RFC4-202ENST00000392481 IGKV1D-13A0A0B4J2D9 117 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 SLC25A17O43808 307 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 GABARAPO95166 117 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 IGLV1-40P01703 118 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 IGLV2-23P01705 113 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 IGKV1-13P0DP09 117 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 PTHLHP12272 177 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 MYCNOSP40205 109 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 TMEM267Q0VDI3 215 aaPredicted RBP9.25□□□□□ -0.93
RFC4-202ENST00000392481 CTF1Q16619 201 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 PDLIM3Q53GG5 364 aaPredicted RBP9.25□□□□□ -0.93
RFC4-202ENST00000392481 C19orf54Q5BKX5 351 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 TMEM65Q6PI78 240 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 LINC00482Q8N8I6 264 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 BVESQ8NE79 360 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 MYOZ3Q8TDC0 251 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 ACOT12Q8WYK0 555 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 CMTM3Q96MX0 182 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 FBXO7Q9Y3I1 522 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 NUBP2Q9Y5Y2 271 aa9.25□□□□□ -0.93
RFC4-202ENST00000392481 LINC00473A8K010 186 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 J3QRK9 145 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 SHOXO15266 292 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 APOA1P02647 267 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 EGR2P11161 476 aaPredicted RBP9.24□□□□□ -0.93
RFC4-202ENST00000392481 ALDH3B2P48448 385 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 RORCP51449 518 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 TAS2R20P59543 309 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 GPR107Q5VW38 600 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 PPP1R27Q86WC6 154 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 MRPL41Q8IXM3 137 aaKnown RBP9.24□□□□□ -0.93
RFC4-202ENST00000392481 TCTEX1D1Q8N7M0 179 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 ABHD5Q8WTS1 349 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 SNAPC3Q92966 411 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 RCC1LQ96I51 464 aaKnown RBP9.24□□□□□ -0.93
RFC4-202ENST00000392481 HARBI1Q96MB7 349 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 CLCC1Q96S66 551 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 P2RX4Q99571 388 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 NAA50Q9GZZ1 169 aaKnown RBP9.24□□□□□ -0.93
RFC4-202ENST00000392481 KLK15Q9H2R5 256 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 TPSG1Q9NRR2 321 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 NECAP2Q9NVZ3 263 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 COMMD3Q9UBI1 195 aa9.24□□□□□ -0.93
RFC4-202ENST00000392481 FOXA2Q9Y261 457 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms