RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 KIAA1324LA8MWY0 1029 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 RAB29O14966 203 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 IGHV3-7P01780 117 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 P0C879 139 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 TPT1P13693 172 aaKnown RBP9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 DAOP14920 347 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 ZNF816Q0VGE8 651 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 OR2B11Q5JQS5 317 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 TRBV23-1A0A0A0MS06 115 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 TMEM238LA0A1B0GVL6 79 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 M0R1X1 148 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 RBFOX2O43251 390 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 SSSCA1O60232 199 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 S1PR2O95136 353 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 SSTP61278 116 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 RPL39P5Q59GN2 51 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 NCR3LG1Q68D85 454 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 SLC25A48Q6ZT89 311 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 ODF3L1Q8IXM7 274 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 CACNA1BQ00975 2339 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 HRNRQ86YZ3 2850 aaPredicted RBP9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 CFAP46Q8IYW2 2715 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 SAA2-SAA4A0A096LPE2 208 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 SAA2P0DJI9 122 aaPredicted RBP9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 CCL3L1P16619 93 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 KIR2DS2P43631 304 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 TMEM33P57088 247 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 IZUMO4Q1ZYL8 232 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 TMEM155Q4W5P6 130 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 BAP18Q8IXM2 172 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 OR2C3Q8N628 320 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 ZNF251Q9BRH9 671 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 MAGT1Q9H0U3 335 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 LYRM2Q9NU23 88 aaPredicted RBP9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 FBXL17Q9UF56 701 aa9.41□□□□□ -0.9
SMARCAL1-203ENST00000392128 DOCK11Q5JSL3 2073 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 A6NNC1 897 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 FAM90A26D6RGX4 464 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 WRBO00258 174 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 GPR37O15354 613 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 GAPDHP04406 335 aaKnown RBP9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 NMBP08949 121 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 G6PCP35575 357 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 DLX6P56179 175 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 LINC00205P59089 165 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 VAMP2P63027 116 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 EIF5AP63241 154 aaKnown RBP9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 ZNF841Q6ZN19 808 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 DDB2Q92466 427 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 RAB39BQ96DA2 213 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 SLC25A32Q9H2D1 315 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 PFDN2Q9UHV9 154 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 RALYQ9UKM9 306 aaKnown RBP9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 NUP50Q9UKX7 468 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 AUP1Q9Y679 476 aa9.4□□□□□ -0.9
SMARCAL1-203ENST00000392128 A0A1W2PPE3 182 aa9.4□□□□□ -0.91
SMARCAL1-203ENST00000392128 GOSR1O95249 250 aa9.4□□□□□ -0.91
SMARCAL1-203ENST00000392128 HPRT1P00492 218 aa9.4□□□□□ -0.91
SMARCAL1-203ENST00000392128 KRASP01116 189 aa9.4□□□□□ -0.91
SMARCAL1-203ENST00000392128 GNG10P50151 68 aa9.4□□□□□ -0.91
SMARCAL1-203ENST00000392128 C1orf229Q6ZS94 237 aaPredicted RBP9.4□□□□□ -0.91
SMARCAL1-203ENST00000392128 LINC00518Q8N0U6 118 aa9.4□□□□□ -0.91
SMARCAL1-203ENST00000392128 LYG1Q8N1E2 194 aa9.4□□□□□ -0.91
SMARCAL1-203ENST00000392128 C8orf31Q8N9H6 132 aa9.4□□□□□ -0.91
SMARCAL1-203ENST00000392128 MARVELD3Q96A59 401 aa9.4□□□□□ -0.91
SMARCAL1-203ENST00000392128 TIMD4Q96H15 378 aa9.4□□□□□ -0.91
SMARCAL1-203ENST00000392128 RAB40CQ96S21 281 aa9.4□□□□□ -0.91
SMARCAL1-203ENST00000392128 PRELID3BQ9Y3B1 194 aa9.4□□□□□ -0.91
SMARCAL1-203ENST00000392128 TOR1AO14656 332 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 CHST1O43916 411 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 FCGR3BO75015 233 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 JTBO76095 146 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 THBS3P49746 956 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 MIDNQ504T8 468 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 PCNPQ8WW12 178 aaKnown RBP9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 RAB1CQ92928 201 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 ADTRPQ96IZ2 230 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 BBC3Q96PG8 261 aaPredicted RBP9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 S1PR3Q99500 378 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 SLC25A31Q9H0C2 315 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 MIOXQ9UGB7 285 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 A0A087X0M5 115 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 A0A1B0GX30 115 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 LY6HO94772 140 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 NXPH3O95157 252 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 TMEM50AO95807 157 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 CAV2P51636 162 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 PAX9P55771 341 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 EWSR1Q01844 656 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 AVPI1Q5T686 147 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 RPL7L1Q6DKI1 246 aaKnown RBP9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 ZNF596Q8TC21 504 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 CHODLQ9H9P2 273 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 UBTD1Q9HAC8 227 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 WSB1Q9Y6I7 421 aa9.39□□□□□ -0.91
SMARCAL1-203ENST00000392128 IGSF23A1L1A6 192 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 FAM24AA6NFZ4 105 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 MARCH11A6NNE9 402 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 SYNGR2O43760 224 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 ERVFRD-1P60508 538 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms