RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 GAGE12IP0CL82 117 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 CCL8P80075 99 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 GAGE4Q13068 117 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 NKG7Q16617 165 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 FER1L6-AS1Q8NA97 138 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 ZBTB34Q8NCN2 500 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 MRPL24Q96A35 216 aaKnown RBP9.38□□□□□ -0.91
CLCN4-202ENST00000380833 PERPQ96FX8 193 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 QTRT1Q9BXR0 403 aaKnown RBP9.38□□□□□ -0.91
CLCN4-202ENST00000380833 TUBD1Q9UJT1 453 aa9.38□□□□□ -0.91
CLCN4-202ENST00000380833 TSSC4Q9Y5U2 329 aaPredicted RBP9.38□□□□□ -0.91
CLCN4-202ENST00000380833 AMBPP02760 352 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 HEPN1Q6WQI6 88 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 ADAMTSL5Q6ZMM2 481 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 ARHGAP5-AS1Q96IT6 56 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 KLF12Q9Y4X4 402 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 CBLN1P23435 193 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 IRF3Q14653 427 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 KIAA1644Q3SXP7 199 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 ZNF664Q8N3J9 261 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 SOSTQ9BQB4 213 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 B9D1Q9UPM9 204 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 MYH14Q7Z406 1995 aaKnown RBP9.37□□□□□ -0.91
CLCN4-202ENST00000380833 IGHV4-34P06331 123 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 GNG3P63215 75 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 TMEM215Q68D42 235 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 FAM222BQ8WU58 562 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 INSIG2Q9Y5U4 225 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 TRAV9-1A0A075B6T8 112 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 COLCA2A8K830 154 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 HOXA3O43365 443 aaPredicted RBP9.37□□□□□ -0.91
CLCN4-202ENST00000380833 VENTXO95231 258 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 HSPE1P61604 102 aaKnown RBP9.37□□□□□ -0.91
CLCN4-202ENST00000380833 APCDD1LQ8NCL9 501 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 PRTN3P24158 256 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 RASL11AQ6T310 242 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 FOXC2Q99958 501 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 TMEM30AQ9NV96 361 aa9.37□□□□□ -0.91
CLCN4-202ENST00000380833 CEACAM1P13688 526 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 ZNF324BQ6AW86 544 aaPredicted RBP9.36□□□□□ -0.91
CLCN4-202ENST00000380833 SSMEM1Q8WWF3 244 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 SDHCQ99643 169 aaPredicted RBP9.36□□□□□ -0.91
CLCN4-202ENST00000380833 B5MCH6 92 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 FCN3O75636 299 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 RNPS1Q15287 305 aaKnown RBP9.36□□□□□ -0.91
CLCN4-202ENST00000380833 OGG1O15527 345 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 TSPO2Q5TGU0 170 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 TPRX1Q8N7U7 411 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 PRDM6Q9NQX0 595 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 CEACAM3P40198 252 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 KCNMB1Q16558 191 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 ATP1A1-AS1Q5TC04 95 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 GVQW1Q8N7I0 195 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 RGPD2P0DJD1 1756 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 TRAV8-6A0A0B4J262 113 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 SVIPQ8NHG7 77 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 hADV38S2A0JD32 116 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 ODAMA1E959 279 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 SERF1AO75920 110 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 CIRBPQ14011 172 aaKnown RBP9.36□□□□□ -0.91
CLCN4-202ENST00000380833 C5orf47Q569G3 176 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 OR5AN1Q8NGI8 311 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 DCTN5Q9BTE1 182 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 SNHG12Q9BXW3 62 aa9.36□□□□□ -0.91
CLCN4-202ENST00000380833 ZNF665Q9H7R5 613 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 PLSCR2Q9NRY7 297 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 HDGFL3Q9Y3E1 203 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 C4AP0C0L4 1744 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 PLCH1Q4KWH8 1693 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 LRRC37A3O60309 1634 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 IGHV1OR21-1A0A087WYE8 117 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 TRAV2A0A0B4J234 112 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 NKX2-8O15522 239 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 FCGR2BP31994 310 aaPredicted RBP9.35□□□□□ -0.91
CLCN4-202ENST00000380833 MMD2Q8IY49 270 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 CNRIP1Q96F85 164 aaPredicted RBP9.35□□□□□ -0.91
CLCN4-202ENST00000380833 OR2A4O95047 310 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 TDGF1P13385 188 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 LSM6P62312 80 aaKnown RBP9.35□□□□□ -0.91
CLCN4-202ENST00000380833 DNM1P46Q6ZS02 220 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 OR2A7Q96R45 310 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 GP6Q9HCN6 339 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 SIGLEC1Q9BZZ2 1709 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 C1QL1O75973 258 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 PRSS2P07478 247 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 CD300EQ496F6 205 aaPredicted RBP9.35□□□□□ -0.91
CLCN4-202ENST00000380833 MEIG1Q5JSS6 88 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 OR8B12Q8NGG6 310 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 MOB4Q9Y3A3 225 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 DLG5Q8TDM6 1919 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 MYO7AQ13402 2215 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 MS4A6AQ9H2W1 248 aa9.35□□□□□ -0.91
CLCN4-202ENST00000380833 PAPPAQ13219 1627 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 CD5LO43866 347 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 CKS2P33552 79 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 SPRED2Q7Z698 418 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 SELENOKQ9Y6D0 94 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 GAGE12HA6NDE8 117 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 PRSS23O95084 383 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 ASAH2BP0C7U1 165 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms