RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 TNFRSF18Q9Y5U5 241 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 IGLV3-32A0A0A0MS00 114 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 LOC101059948A0A1B0GTJ6 334 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 C1QTNF9BB2RNN3 333 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 K7EP34 96 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 CLPSP04118 112 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 FRMD6-AS1P0C7T7 363 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 LINC00869P0C866 280 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 MDH2P40926 338 aaKnown RBP6.35□□□□□ -1.39
CDKL5-201ENST00000379989 ECI1P42126 302 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 C1orf61Q13536 156 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 HLA-DRB5Q30154 266 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 SPATA31B1PQ5VZV4 182 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 INO80CQ6PI98 192 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-201ENST00000379989 OR4F5Q8NH21 305 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF721Q8TF20 911 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 GATAD1Q8WUU5 269 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 C1orf147Q96MC9 270 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-201ENST00000379989 GPER1Q99527 375 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 MOB1AQ9H8S9 216 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF286AQ9HBT8 521 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 B3GALT1Q9Y5Z6 326 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 ARHGEF17Q96PE2 2063 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-201ENST00000379989 ADAMTS20P59510 1910 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 IGHV5-51A0A0C4DH38 117 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 A0A1B0GW15 77 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 MPPED1O15442 326 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 CELA2BP08218 269 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-201ENST00000379989 CA7P43166 264 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 PMP22Q01453 160 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 C19orf35Q6ZS72 473 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 CCDC71LQ8N9Z2 235 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 OR5A2Q8NGI9 324 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 CT55Q8WUE5 264 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 SPACA5Q96QH8 159 aa6.35□□□□□ -1.39
CDKL5-201ENST00000379989 PSMG3Q9BT73 122 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-201ENST00000379989 A0A1W2PR80 420 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 KIAA1324LA8MWY0 1029 aaPredicted RBP6.34□□□□□ -1.39
CDKL5-201ENST00000379989 LAMTOR5O43504 91 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 SRSF10O75494 262 aaKnown RBP6.34□□□□□ -1.39
CDKL5-201ENST00000379989 NPPCP23582 126 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 IL12BP29460 328 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 CTXN1P60606 82 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 RHOBP62745 196 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 MEF2CQ06413 473 aaPredicted RBP6.34□□□□□ -1.39
CDKL5-201ENST00000379989 ACSF3Q4G176 576 aaPredicted RBP6.34□□□□□ -1.39
CDKL5-201ENST00000379989 PRSS41Q7RTY9 318 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 ZAR1Q86SH2 424 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 LINC00346Q8IVM7 164 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 OR4N5Q8IXE1 308 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 LRRC75AQ8NAA5 344 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 LHX4Q969G2 390 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 LINC00470Q9BZP3 86 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 JPT1Q9UK76 154 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 EMC9Q9Y3B6 208 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 TRAV36DV7A0A075B6V5 113 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 LOC102725191A0A1B0GVB3 256 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF878C9JN71 531 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 F2RL2O00254 374 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 FCN1O00602 326 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 UTS2O95399 124 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 SRD5A2P31213 254 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 ROM1Q03395 351 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 Q56UQ5 140 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 SLC25A53Q5H9E4 307 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 CXorf66Q5JRM2 361 aaPredicted RBP6.34□□□□□ -1.39
CDKL5-201ENST00000379989 GLIPR1L1Q6UWM5 242 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 DOK4Q8TEW6 326 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 SPATA25Q9BR10 227 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 CPAMD8Q8IZJ3 1885 aa6.34□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF716A6NP11 495 aa6.34□□□□□ -1.4
CDKL5-201ENST00000379989 PDE6DO43924 150 aa6.34□□□□□ -1.4
CDKL5-201ENST00000379989 PSMB3P49720 205 aa6.34□□□□□ -1.4
CDKL5-201ENST00000379989 RPL24P83731 157 aaKnown RBP6.34□□□□□ -1.4
CDKL5-201ENST00000379989 ARF1P84077 181 aaKnown RBP6.34□□□□□ -1.4
CDKL5-201ENST00000379989 PHLDA2Q53GA4 152 aa6.34□□□□□ -1.4
CDKL5-201ENST00000379989 BORCS7Q96B45 105 aa6.34□□□□□ -1.4
CDKL5-201ENST00000379989 ADAT3Q96EY9 351 aaPredicted RBP6.34□□□□□ -1.4
CDKL5-201ENST00000379989 TMEM59Q9BXS4 323 aa6.34□□□□□ -1.4
CDKL5-201ENST00000379989 WDR61Q9GZS3 305 aaKnown RBP6.34□□□□□ -1.4
CDKL5-201ENST00000379989 SHANK1Q9Y566 2161 aa6.34□□□□□ -1.4
CDKL5-201ENST00000379989 GP1BBP13224 206 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 CYB561P49447 251 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 ALG10Q5BKT4 473 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 ZNF841Q6ZN19 808 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 ZNF114Q8NC26 417 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 NINJ1Q92982 152 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 C8orf44Q96CB5 159 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 PERPQ96FX8 193 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 C19orf24Q9BVV8 132 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 ST20Q9HBF5 79 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 FGF21Q9NSA1 209 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 PGPEP1LA6NFU8 196 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 SIVA1O15304 175 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 RENP00797 406 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 IFNA5P01569 189 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 HLA-DQA2P01906 255 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 ISG15P05161 165 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 ASAH2BP0C7U1 165 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 NTF3P20783 257 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms