RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 BATFQ16520 125 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 UQCC3Q6UW78 93 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 ZNF818PQ6ZRF7 136 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 SPACA3Q8IXA5 215 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 BAP18Q8IXM2 172 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 OR10V1Q8NGI7 309 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 WNT2BQ93097 391 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 MUCL1Q96DR8 90 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 PCGF1Q9BSM1 259 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 GAR1Q9NY12 217 aaKnown RBP9.12□□□□□ -0.95
NEDD9-201ENST00000379433 PSG11Q9UQ72 335 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 MLNRO43193 412 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 CST4P01036 141 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 CAV2P51636 162 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 LINC00205P59089 165 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 SPRNQ5BIV9 151 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 RTL6Q6ICC9 239 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 GFRALQ6UXV0 394 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 RNF152Q8N8N0 203 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 OR10D4PQ8NGN7 298 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 ASF1BQ9NVP2 202 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 METRNQ9UJH8 293 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 TNFSF18Q9UNG2 199 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 FAM215AQ9Y5M1 114 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 IGHV1-18A0A0C4DH31 117 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 AREGP15514 252 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 ACOT7LQ6ZUV0 252 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 TBC1D26Q86UD7 250 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 ZNF695Q8IW36 515 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 TMEM217Q8N7C4 229 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 PLPPR1Q8TBJ4 325 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 CFHR4Q92496 578 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 MRPS24Q96EL2 167 aaKnown RBP9.11□□□□□ -0.95
NEDD9-201ENST00000379433 C14orf79Q96F83 325 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 AKR1E2Q96JD6 320 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 RNF126Q9BV68 326 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 OR51I2Q9H344 312 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 MPC1Q9Y5U8 109 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 IGKV1-6A0A0C4DH72 117 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 HMSDA8MTL9 139 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 PSPNO60542 156 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 GGCTO75223 188 aaKnown RBP9.11□□□□□ -0.95
NEDD9-201ENST00000379433 OR2B8PP59922 312 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 MRPL23Q16540 153 aaKnown RBP9.11□□□□□ -0.95
NEDD9-201ENST00000379433 SMIM20Q8N5G0 67 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 SLC35G3Q8N808 338 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 TMEM116Q8NCL8 245 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 TMEM185AQ8NFB2 350 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 TMEM231Q9H6L2 316 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 SEC14L6B5MCN3 397 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 AP4M1O00189 453 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 GFRA3O60609 400 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 PF4P02776 101 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 EDDM3BP56851 147 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 RPS16P62249 146 aaKnown RBP9.11□□□□□ -0.95
NEDD9-201ENST00000379433 INO80CQ6PI98 192 aaPredicted RBP9.11□□□□□ -0.95
NEDD9-201ENST00000379433 LYG1Q8N1E2 194 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 OR4C5Q8NGB2 326 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 NAA60Q9H7X0 242 aa9.11□□□□□ -0.95
NEDD9-201ENST00000379433 IGHV2OR16-5A0A0B4J2B6 119 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 J3QT63 122 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 CRYAAP02489 173 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 NMBP08949 121 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 MSMPQ1L6U9 139 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 ZNF718Q3SXZ3 478 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 PINX1Q96BK5 328 aaKnown RBP9.1□□□□□ -0.95
NEDD9-201ENST00000379433 RASL12Q9NYN1 266 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 RAXQ9Y2V3 346 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 DCHS2Q6V1P9 2916 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 HIVEP3Q5T1R4 2406 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 A0A1W2PPE3 182 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 OR5H1A6NKK0 313 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 OR5B21A6NL26 309 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 RTP5Q14D33 572 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 RPL7L1Q6DKI1 246 aaKnown RBP9.1□□□□□ -0.95
NEDD9-201ENST00000379433 IGFL2Q6UWQ7 119 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 Q6ZR03 302 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 PDZD9Q8IXQ8 264 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 C2orf50Q96LR7 162 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 Q9N2K0 584 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 NKX2-6A6NCS4 301 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 CRYM-AS1A6NIL9 109 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 K7EPK0 472 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 CTSDP07339 412 aaPredicted RBP9.1□□□□□ -0.95
NEDD9-201ENST00000379433 SELENOTP62341 195 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 NHLRC3Q5JS37 347 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 LDLRAD2Q5SZI1 272 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 AKR1C8PQ5T2L2 129 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 Q6ZSR3 168 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 TGIF2LYQ8IUE0 185 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 FAM71E2Q8N5Q1 922 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 LRRC29Q8WV35 223 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 SRSF8Q9BRL6 282 aaKnown RBP9.1□□□□□ -0.95
NEDD9-201ENST00000379433 HRH4Q9H3N8 390 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 TAF9BQ9HBM6 251 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 SMPXQ9UHP9 88 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 RFNGQ9Y644 331 aa9.1□□□□□ -0.95
NEDD9-201ENST00000379433 PKD1L2Q7Z442 2459 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 C3orf85A0A1B0GTC6 90 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 K7ERU9 68 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms