RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 TGIF2-C20orf24A0A0A6YYL0 155 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 TRGV4A0A0C4DH28 118 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 LDLRAD1Q5T700 205 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 TOMM40O96008 361 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 C10orf111Q8N326 155 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 A0A0U1RQV5 110 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 NDUFS5O43920 106 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 LYZL2Q7Z4W2 148 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 SEMA5BQ9P283 1151 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 TRGV3P03979 118 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 PNLIPP16233 465 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 SRIP30626 198 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 MMP16P51512 607 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 HBDP02042 147 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 CGB7P0DN87 165 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 ACSF3Q4G176 576 aaPredicted RBP11.55□□□□□ -0.56
HIPK3-202ENST00000379016 C1orf122Q6ZSJ8 110 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 GOLT1AQ6ZVE7 132 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 NFAM1Q8NET5 270 aaPredicted RBP11.55□□□□□ -0.56
HIPK3-202ENST00000379016 SCN9AQ15858 1988 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 C7orf77A4D0Y5 90 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 NRIP2Q9BQI9 281 aa11.55□□□□□ -0.56
HIPK3-202ENST00000379016 YAE1D1Q9NRH1 226 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 CTXND1A0A1B0GTU2 59 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 LMO7DNF2Z398 122 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 ASAH2BP0C7U1 165 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 CGB3P0DN86 165 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 CADP27708 2225 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 ETHE1O95571 254 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 PPYP01298 95 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 SRD5A2P31213 254 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 CACNA1SQ13698 1873 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 DCAF12L2Q5VW00 463 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 ANAPC10Q9UM13 185 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 PRR35P0CG20 571 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 SMIM6P0DI80 62 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 RPS11P62280 158 aaKnown RBP eCLIP11.54□□□□□ -0.56
HIPK3-202ENST00000379016 WDR82Q6UXN9 313 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 UBR1Q8IWV7 1749 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 CXorf65A6NEN9 183 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 ARFGEF3Q5TH69 2177 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 PITX3O75364 302 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 PGLYRP3Q96LB9 341 aa11.54□□□□□ -0.56
HIPK3-202ENST00000379016 CISD1Q9NZ45 108 aaKnown RBP11.54□□□□□ -0.56
HIPK3-202ENST00000379016 CHD3Q12873 2000 aaKnown RBP11.53□□□□□ -0.56
HIPK3-202ENST00000379016 KBTBD11-OT1A0A1B0GTJ5 212 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 VWC2LB2RUY7 222 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 KLF4O43474 513 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 PCSK4Q6UW60 755 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 TLNRD1Q9H1K6 362 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 ZNF275Q9NSD4 429 aaPredicted RBP11.53□□□□□ -0.56
HIPK3-202ENST00000379016 ABCA7Q8IZY2 2146 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 LEUTXA8MZ59 168 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 TMEM240Q5SV17 173 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 SELENOHQ8IZQ5 122 aaKnown RBP11.53□□□□□ -0.56
HIPK3-202ENST00000379016 CHST5Q9GZS9 411 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 ZBTB42B2RXF5 422 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 F12P00748 615 aaPredicted RBP11.53□□□□□ -0.56
HIPK3-202ENST00000379016 RIPPLY3P57055 190 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 DMRTA1Q5VZB9 504 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 PMCHL2Q9BQD1 86 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 MS4A6AQ9H2W1 248 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 LEAP2Q969E1 77 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 IGHV5-51A0A0C4DH38 117 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 IGF2P01344 180 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 ZFP36L2P47974 494 aaKnown RBP11.53□□□□□ -0.56
HIPK3-202ENST00000379016 GAGE2EQ4V326 116 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 DTX2Q86UW9 622 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 C14orf144Q96I85 54 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 GSN-AS1Q9NRJ2 163 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 GAGE2DQ9UEU5 116 aa11.53□□□□□ -0.56
HIPK3-202ENST00000379016 IGKV6-21A0A0C4DH24 114 aa11.52□□□□□ -0.56
HIPK3-202ENST00000379016 ADARB2-AS1A8MUL3 147 aa11.52□□□□□ -0.56
HIPK3-202ENST00000379016 PLPP3O14495 311 aa11.52□□□□□ -0.56
HIPK3-202ENST00000379016 TM4SF4P48230 202 aa11.52□□□□□ -0.56
HIPK3-202ENST00000379016 OR2H1Q9GZK4 316 aa11.52□□□□□ -0.56
HIPK3-202ENST00000379016 ABCA1O95477 2261 aa11.52□□□□□ -0.56
HIPK3-202ENST00000379016 FAM71F2Q6NXP2 309 aa11.52□□□□□ -0.56
HIPK3-202ENST00000379016 SHISA5Q8N114 240 aa11.52□□□□□ -0.56
HIPK3-202ENST00000379016 TMEM86BQ8N661 226 aa11.52□□□□□ -0.56
HIPK3-202ENST00000379016 TMEM74BQ9NUR3 256 aa11.52□□□□□ -0.56
HIPK3-202ENST00000379016 LOC105371242A0A075B767 164 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 NPIPB4C9JG80 1138 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 PAQR9Q6ZVX9 377 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 WFDC12Q8WWY7 111 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 ZNF488Q96MN9 340 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 DNAJC4Q9NNZ3 241 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 ARL14EPLP0DKL9 152 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 ZNF818PQ6ZRF7 136 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 RNF182Q8N6D2 247 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 SSBP4Q9BWG4 385 aaPredicted RBP11.52□□□□□ -0.57
HIPK3-202ENST00000379016 TRGC2P03986 189 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 RCC1P18754 421 aaPredicted RBP11.52□□□□□ -0.57
HIPK3-202ENST00000379016 PEF1Q9UBV8 284 aaKnown RBP11.52□□□□□ -0.57
HIPK3-202ENST00000379016 CLDN16Q9Y5I7 305 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 TCEAL1Q15170 157 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 RBMY1FQ15415 496 aaKnown RBP11.52□□□□□ -0.57
HIPK3-202ENST00000379016 ANXA2RQ3ZCQ2 193 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 LRP10Q7Z4F1 713 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 MEGF9Q9H1U4 602 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms