RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GLDNQ6ZMI3 551 aaPredicted RBP10.54□□□□□ -0.72
CKAP2-202ENST00000378034 C3orf56Q8N813 242 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 TMEM229BQ8NBD8 167 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 C5orf30Q96GV9 206 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 PLSCR3Q9NRY6 295 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 TAS2R8Q9NYW2 309 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 RBMX2Q9Y388 322 aaKnown RBP10.54□□□□□ -0.72
CKAP2-202ENST00000378034 H7C2Y5 167 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 J3QRK9 145 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 DUTP33316 252 aaKnown RBP10.54□□□□□ -0.72
CKAP2-202ENST00000378034 PROK1P58294 105 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 TAS2R19P59542 299 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 CBX3Q13185 183 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 ABCA11PQ4W5N1 156 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 RNASE12Q5GAN4 147 aaKnown RBP10.54□□□□□ -0.72
CKAP2-202ENST00000378034 CCDC190Q86UF4 302 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 DRAXINQ8NBI3 349 aaPredicted RBP10.54□□□□□ -0.72
CKAP2-202ENST00000378034 NPBQ8NG41 125 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 MOB3AQ96BX8 217 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 HSD17B10Q99714 261 aaKnown RBP10.54□□□□□ -0.72
CKAP2-202ENST00000378034 ZNF2Q9BSG1 426 aaPredicted RBP10.54□□□□□ -0.72
CKAP2-202ENST00000378034 ZNF747Q9BV97 191 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 LIN7CQ9NUP9 197 aaKnown RBP10.54□□□□□ -0.72
CKAP2-202ENST00000378034 IGLV2-14P01704 120 aa10.53□□□□□ -0.72
CKAP2-202ENST00000378034 CSF1P09603 554 aa10.53□□□□□ -0.72
CKAP2-202ENST00000378034 TSPAN5P62079 268 aa10.53□□□□□ -0.72
CKAP2-202ENST00000378034 RNASE10Q5GAN6 216 aaKnown RBP10.53□□□□□ -0.72
CKAP2-202ENST00000378034 ZNF66Q6ZN08 573 aa10.53□□□□□ -0.72
CKAP2-202ENST00000378034 TMEM17Q86X19 198 aa10.53□□□□□ -0.72
CKAP2-202ENST00000378034 Q8N9W7 124 aa10.53□□□□□ -0.72
CKAP2-202ENST00000378034 OR6Q1Q8NGQ2 317 aa10.53□□□□□ -0.72
CKAP2-202ENST00000378034 SECTM1Q8WVN6 248 aa10.53□□□□□ -0.72
CKAP2-202ENST00000378034 RASL11BQ9BPW5 248 aa10.53□□□□□ -0.72
CKAP2-202ENST00000378034 SLC5A7Q9GZV3 580 aa10.53□□□□□ -0.72
CKAP2-202ENST00000378034 SLC35D1Q9NTN3 355 aa10.53□□□□□ -0.72
CKAP2-202ENST00000378034 NBR2O15453 112 aa10.52□□□□□ -0.72
CKAP2-202ENST00000378034 CD74P04233 296 aa10.52□□□□□ -0.72
CKAP2-202ENST00000378034 IFNA6P05013 189 aa10.52□□□□□ -0.72
CKAP2-202ENST00000378034 ETV6P41212 452 aa10.52□□□□□ -0.72
CKAP2-202ENST00000378034 F2RL1P55085 397 aa10.52□□□□□ -0.72
CKAP2-202ENST00000378034 MMDQ15546 238 aa10.52□□□□□ -0.72
CKAP2-202ENST00000378034 RTL8BQ17RB0 113 aa10.52□□□□□ -0.72
CKAP2-202ENST00000378034 ARSJQ5FYB0 599 aaPredicted RBP10.52□□□□□ -0.72
CKAP2-202ENST00000378034 SPANXN2Q5MJ10 180 aa10.52□□□□□ -0.72
CKAP2-202ENST00000378034 ARRDC1Q8N5I2 433 aa10.52□□□□□ -0.72
CKAP2-202ENST00000378034 FAM71E2Q8N5Q1 922 aa10.52□□□□□ -0.72
CKAP2-202ENST00000378034 DDB2Q92466 427 aa10.52□□□□□ -0.72
CKAP2-202ENST00000378034 FLYWCH2Q96CP2 140 aaKnown RBP10.52□□□□□ -0.72
CKAP2-202ENST00000378034 PRELID3BQ9Y3B1 194 aa10.52□□□□□ -0.72
CKAP2-202ENST00000378034 NDUFA3O95167 84 aa10.52□□□□□ -0.73
CKAP2-202ENST00000378034 CD3DP04234 171 aa10.52□□□□□ -0.73
CKAP2-202ENST00000378034 VDAC2P45880 294 aaPredicted RBP10.52□□□□□ -0.73
CKAP2-202ENST00000378034 FXYD4P59646 89 aa10.52□□□□□ -0.73
CKAP2-202ENST00000378034 EIF4EBP1Q13541 118 aaPredicted RBP10.52□□□□□ -0.73
CKAP2-202ENST00000378034 LPCAT3Q6P1A2 487 aa10.52□□□□□ -0.73
CKAP2-202ENST00000378034 WFDC12Q8WWY7 111 aa10.52□□□□□ -0.73
CKAP2-202ENST00000378034 TSNAXQ99598 290 aaKnown RBP10.52□□□□□ -0.73
CKAP2-202ENST00000378034 CCL28Q9NRJ3 127 aa10.52□□□□□ -0.73
CKAP2-202ENST00000378034 SERTAD4Q9NUC0 356 aa10.52□□□□□ -0.73
CKAP2-202ENST00000378034 KIAA1456Q9P272 454 aa10.52□□□□□ -0.73
CKAP2-202ENST00000378034 V9GYH0 126 aa10.52□□□□□ -0.73
CKAP2-202ENST00000378034 SPDEFO95238 335 aa10.51□□□□□ -0.73
CKAP2-202ENST00000378034 LGALS7P47929 136 aa10.51□□□□□ -0.73
CKAP2-202ENST00000378034 LINC00205P59089 165 aa10.51□□□□□ -0.73
CKAP2-202ENST00000378034 MEF2DQ14814 521 aa10.51□□□□□ -0.73
CKAP2-202ENST00000378034 TMEM177Q53S58 311 aa10.51□□□□□ -0.73
CKAP2-202ENST00000378034 STEAP1BQ6NZ63 245 aa10.51□□□□□ -0.73
CKAP2-202ENST00000378034 SHISA2Q6UWI4 295 aa10.51□□□□□ -0.73
CKAP2-202ENST00000378034 Q6ZS46 218 aa10.51□□□□□ -0.73
CKAP2-202ENST00000378034 KCTD9Q7L273 389 aa10.51□□□□□ -0.73
CKAP2-202ENST00000378034 RITA1Q96K30 269 aa10.51□□□□□ -0.73
CKAP2-202ENST00000378034 SIGLEC9Q9Y336 463 aa10.51□□□□□ -0.73
CKAP2-202ENST00000378034 LINC00473A8K010 186 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 M0QYG6 137 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 RAB3DO95716 219 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 IGHG2P01859 326 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 IGKV1-16P04430 117 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 UCP3P55916 312 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 RPS16P62249 146 aaKnown RBP10.5□□□□□ -0.73
CKAP2-202ENST00000378034 PYDC2Q56P42 97 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 C9orf152Q5JTZ5 239 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 MFSD4AQ8N468 514 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 BVESQ8NE79 360 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 TSC22D3Q99576 134 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 HAX1O00165 279 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 RRHO14718 337 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 KCNAB3O43448 404 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 PEX14O75381 377 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 GNRHRP30968 328 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 KIR2DS2P43631 304 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 CATR1Q13166 79 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 C5orf64Q2M2E5 130 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 ZNF818PQ6ZRF7 136 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 LINC00299Q6ZSB3 139 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 CMTM1Q8IZ96 169 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 OSR1Q8TAX0 266 aaPredicted RBP10.5□□□□□ -0.73
CKAP2-202ENST00000378034 THAP7Q9BT49 309 aaPredicted RBP10.5□□□□□ -0.73
CKAP2-202ENST00000378034 TINAGL1Q9GZM7 467 aaPredicted RBP10.5□□□□□ -0.73
CKAP2-202ENST00000378034 WNT10AQ9GZT5 417 aa10.5□□□□□ -0.73
CKAP2-202ENST00000378034 STAB1Q9NY15 2570 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms