RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 HTR1DP28221 377 aa13.96□□□□□ -0.17
HLA-DMA-201ENST00000374843 BRWD1-AS2P59051 145 aa13.96□□□□□ -0.17
HLA-DMA-201ENST00000374843 SP6Q3SY56 376 aa13.96□□□□□ -0.17
HLA-DMA-201ENST00000374843 MIDNQ504T8 468 aa13.96□□□□□ -0.17
HLA-DMA-201ENST00000374843 LDLRAD2Q5SZI1 272 aa13.96□□□□□ -0.17
HLA-DMA-201ENST00000374843 LGI3Q8N145 548 aa13.96□□□□□ -0.17
HLA-DMA-201ENST00000374843 ZNF383Q8NA42 475 aa13.96□□□□□ -0.17
HLA-DMA-201ENST00000374843 LHFPL5Q8TAF8 219 aa13.96□□□□□ -0.17
HLA-DMA-201ENST00000374843 CD300LFQ8TDQ1 290 aa13.96□□□□□ -0.17
HLA-DMA-201ENST00000374843 MRPL20Q9BYC9 149 aaKnown RBP13.96□□□□□ -0.17
HLA-DMA-201ENST00000374843 DUXBA0A1W2PPF3 345 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 LEUTXA8MZ59 168 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 OOSP1A8MZH6 123 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 CT45A6P0DMU7 189 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 CT45A5P0DMU8 189 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 CT45A7P0DMV0 189 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 RPA2P15927 270 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 ZNF16P17020 682 aaPredicted RBP13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 TAGLNQ01995 201 aaKnown RBP13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 FCN2Q15485 313 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 ZNF585BQ52M93 769 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 TPTE2P1Q5T6R2 138 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 CYB5R2Q6BCY4 276 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 TGIF2LXQ8IUE1 241 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 OR11H7Q8NGC8 314 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 LHX4Q969G2 390 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 C18orf12Q96KH6 178 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 NABP2Q9BQ15 211 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 RAB18Q9NP72 206 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 PRR13Q9NZ81 148 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 DPM3Q9P2X0 92 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 PRELID3BQ9Y3B1 194 aa13.95□□□□□ -0.18
HLA-DMA-201ENST00000374843 CENPVL3A0A0U1RRI6 287 aa13.94□□□□□ -0.18
HLA-DMA-201ENST00000374843 CEACAM3P40198 252 aa13.94□□□□□ -0.18
HLA-DMA-201ENST00000374843 LINC00205P59089 165 aa13.94□□□□□ -0.18
HLA-DMA-201ENST00000374843 DIAPH2-AS1Q14236 149 aa13.94□□□□□ -0.18
HLA-DMA-201ENST00000374843 SPAG16Q8N0X2 631 aa13.94□□□□□ -0.18
HLA-DMA-201ENST00000374843 CIARTQ8N365 385 aaPredicted RBP13.94□□□□□ -0.18
HLA-DMA-201ENST00000374843 DRAXINQ8NBI3 349 aaPredicted RBP13.94□□□□□ -0.18
HLA-DMA-201ENST00000374843 OR5AN1Q8NGI8 311 aa13.94□□□□□ -0.18
HLA-DMA-201ENST00000374843 OR5M8Q8NGP6 311 aa13.94□□□□□ -0.18
HLA-DMA-201ENST00000374843 RBPMSQ93062 196 aaKnown RBP13.94□□□□□ -0.18
HLA-DMA-201ENST00000374843 C7orf69Q9H7B7 122 aa13.94□□□□□ -0.18
HLA-DMA-201ENST00000374843 ZANQ9Y493 2812 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 IGHV1-69DA0A0B4J2H0 117 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 A0A1W2PPI3 338 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 H0YJW9 148 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 RAMP3O60896 148 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 TGFAP01135 160 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 IGKV1-39P01597 117 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 IGHV1-69P01742 117 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 GAPDHP04406 335 aaKnown RBP13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 IGKV1D-39P04432 117 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 SERPINE2P07093 398 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 HABP2Q14520 560 aaPredicted RBP13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 C2orf68Q2NKX9 166 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 DHRS7BQ6IAN0 325 aaPredicted RBP13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 LIN54Q6MZP7 749 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 SELENOHQ8IZQ5 122 aaKnown RBP13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 OR8H3Q8N146 312 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 OR4S2Q8NH73 311 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 RPEQ96AT9 228 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 AJUBAQ96IF1 538 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 PLEKHA2Q9HB19 425 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 COMMD9Q9P000 198 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 MGAT4CQ9UBM8 478 aa13.93□□□□□ -0.18
HLA-DMA-201ENST00000374843 TRAV40A0A0B4J280 105 aa13.92□□□□□ -0.18
HLA-DMA-201ENST00000374843 IGHV1-3A0A0C4DH29 117 aa13.92□□□□□ -0.18
HLA-DMA-201ENST00000374843 NPFFO15130 113 aa13.92□□□□□ -0.18
HLA-DMA-201ENST00000374843 FSHBP01225 129 aa13.92□□□□□ -0.18
HLA-DMA-201ENST00000374843 RRASP10301 218 aa13.92□□□□□ -0.18
HLA-DMA-201ENST00000374843 CXCL3P19876 107 aa13.92□□□□□ -0.18
HLA-DMA-201ENST00000374843 REG1BP48304 166 aa13.92□□□□□ -0.18
HLA-DMA-201ENST00000374843 OR2B11Q5JQS5 317 aa13.92□□□□□ -0.18
HLA-DMA-201ENST00000374843 TMEM268Q5VZI3 342 aa13.92□□□□□ -0.18
HLA-DMA-201ENST00000374843 ASB13Q8WXK3 278 aa13.92□□□□□ -0.18
HLA-DMA-201ENST00000374843 OTOGQ6ZRI0 2925 aa13.92□□□□□ -0.18
HLA-DMA-201ENST00000374843 BAHCC1Q9P281 2608 aa13.92□□□□□ -0.18
HLA-DMA-201ENST00000374843 FLNAP21333 2647 aaKnown RBP13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 A8MV72 311 aaPredicted RBP13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 GOSR2O14653 212 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 FCGR3BO75015 233 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 S1PR2O95136 353 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 AVPP01185 164 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 APOA2P02652 100 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 EPHA1P21709 976 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 SAA4P35542 130 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 RAB13P51153 203 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 KRTAP1-1Q07627 177 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 SRSF4Q08170 494 aaKnown RBP13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 RTL8BQ17RB0 113 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 NMSQ5H8A3 153 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 CCDC144NLQ6NUI1 221 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 LHFPL4Q7Z7J7 247 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 PDPNQ86YL7 162 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 ZNF695Q8IW36 515 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 PDZD9Q8IXQ8 264 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 SLC35G3Q8N808 338 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 SLC35D1Q9NTN3 355 aa13.91□□□□□ -0.18
HLA-DMA-201ENST00000374843 TMED3Q9Y3Q3 217 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms