RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 GCSAMQ8N6F7 178 aa10.07□□□□□ -0.8
HMGCL-202ENST00000374487 COA4Q9NYJ1 87 aa10.07□□□□□ -0.8
HMGCL-202ENST00000374487 GNG12Q9UBI6 72 aa10.07□□□□□ -0.8
HMGCL-202ENST00000374487 ODAMA1E959 279 aa10.07□□□□□ -0.8
HMGCL-202ENST00000374487 FAM90A26D6RGX4 464 aa10.07□□□□□ -0.8
HMGCL-202ENST00000374487 MGST3O14880 152 aa10.07□□□□□ -0.8
HMGCL-202ENST00000374487 ST8SIA5O15466 376 aa10.07□□□□□ -0.8
HMGCL-202ENST00000374487 NKX6-1P78426 367 aaPredicted RBP10.07□□□□□ -0.8
HMGCL-202ENST00000374487 LILRB2Q8N423 598 aa10.07□□□□□ -0.8
HMGCL-202ENST00000374487 EDARADDQ8WWZ3 215 aa10.07□□□□□ -0.8
HMGCL-202ENST00000374487 SNX22Q96L94 193 aa10.07□□□□□ -0.8
HMGCL-202ENST00000374487 SLC35B3Q9H1N7 401 aa10.07□□□□□ -0.8
HMGCL-202ENST00000374487 CRYBG3Q68DQ2 2970 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 SETXQ7Z333 2677 aaKnown RBP10.06□□□□□ -0.8
HMGCL-202ENST00000374487 BTBD17A6NE02 478 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 FAM90A27PA6NNH2 459 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 C17orf98A8MV24 154 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 RBMXL2O75526 392 aaKnown RBP10.06□□□□□ -0.8
HMGCL-202ENST00000374487 S1PR2O95136 353 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 EDDM3BP56851 147 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 RAB2AP61019 212 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 PAX5Q02548 391 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 TNFRSF9Q07011 255 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 Q3ZCU0 254 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 ZNF66Q6ZN08 573 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 TCTEX1D1Q8N7M0 179 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 ZNRF1Q8ND25 227 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 SFT2D1Q8WV19 159 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 ITLN1Q8WWA0 313 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 C5orf30Q96GV9 206 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 HSD17B10Q99714 261 aaKnown RBP10.06□□□□□ -0.8
HMGCL-202ENST00000374487 SCRT1Q9BWW7 348 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.06□□□□□ -0.8
HMGCL-202ENST00000374487 NDRG3Q9UGV2 375 aa10.06□□□□□ -0.8
HMGCL-202ENST00000374487 FLNBO75369 2602 aaKnown RBP10.06□□□□□ -0.8
HMGCL-202ENST00000374487 SPTAN1Q13813 2472 aaKnown RBP10.06□□□□□ -0.8
HMGCL-202ENST00000374487 RBFOX3A6NFN3 312 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 C15orf65H3BRN8 121 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 CCL20P78556 96 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 EIF4EBP1Q13541 118 aaPredicted RBP10.05□□□□□ -0.8
HMGCL-202ENST00000374487 SPRNQ5BIV9 151 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 ZNF787Q6DD87 383 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 H2BFWTQ7Z2G1 175 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 CD300LFQ8TDQ1 290 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 PLPPR2Q96GM1 343 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 RBKSQ9H477 322 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 LAMP3Q9UQV4 416 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 DOPEY1Q5JWR5 2465 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 PTPN13Q12923 2485 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 IGLV3-9A0A075B6K5 115 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 LRRC30A6NM36 301 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 M0R036 132 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 GPR12P47775 334 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 FAM122CQ6P4D5 195 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 DPPA3Q6W0C5 159 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 RND1Q92730 232 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 RARRES2Q99969 163 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 AGMATQ9BSE5 352 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 MRPL37Q9BZE1 423 aaKnown RBP10.05□□□□□ -0.8
HMGCL-202ENST00000374487 SMDT1Q9H4I9 107 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 RPS10P5Q9NQ39 176 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 HSPB7Q9UBY9 170 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 MLXQ9UH92 298 aa10.05□□□□□ -0.8
HMGCL-202ENST00000374487 CACNA1DQ01668 2161 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 A0A1B0GW64 132 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 CLDN14O95500 239 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 OR13C7P0DN81 318 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 CD40P25942 277 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 TNFAIP6P98066 277 aaPredicted RBP10.04□□□□□ -0.8
HMGCL-202ENST00000374487 ARL16Q0P5N6 197 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 OR8G2PQ6IF36 304 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 ZNF525Q8N782 197 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 RSG1Q9BU20 258 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 SEBOXQ9HB31 216 aaPredicted RBP10.04□□□□□ -0.8
HMGCL-202ENST00000374487 SMCO4Q9NRQ5 59 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 LINC00473A8K010 186 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 LHBP01229 141 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 HBE1P02100 147 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 TNFSF4P23510 183 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 BRWD1-AS2P59051 145 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 LINC00205P59089 165 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 HAGHQ16775 308 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 MORN2Q502X0 79 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 SOHLH1Q5JUK2 328 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 SPSB3Q6PJ21 355 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 C22orf34Q6ZV56 151 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 OR6C3Q9NZP0 311 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 KIAA1456Q9P272 454 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 RNF7Q9UBF6 113 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 JPT1Q9UK76 154 aa10.04□□□□□ -0.8
HMGCL-202ENST00000374487 RAB29O14966 203 aa10.03□□□□□ -0.8
HMGCL-202ENST00000374487 SNRNP70P08621 437 aaKnown RBP10.03□□□□□ -0.8
HMGCL-202ENST00000374487 AKR1C3P42330 323 aa10.03□□□□□ -0.8
HMGCL-202ENST00000374487 SLC38A11Q08AI6 406 aa10.03□□□□□ -0.8
HMGCL-202ENST00000374487 HFEQ30201 348 aa10.03□□□□□ -0.8
HMGCL-202ENST00000374487 FAM201AQ5SY85 155 aa10.03□□□□□ -0.8
HMGCL-202ENST00000374487 TMEM108Q6UXF1 575 aa10.03□□□□□ -0.8
HMGCL-202ENST00000374487 CA5BP1Q8WTZ4 195 aa10.03□□□□□ -0.8
HMGCL-202ENST00000374487 RBMXL1Q96E39 390 aaKnown RBP10.03□□□□□ -0.8
HMGCL-202ENST00000374487 C20orf24Q9BUV8 137 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms