RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 RCVRNP35243 200 aa12.69□□□□□ -0.38
HDHD3-202ENST00000374180 SRSF4Q08170 494 aaKnown RBP12.69□□□□□ -0.38
HDHD3-202ENST00000374180 MMDQ15546 238 aa12.69□□□□□ -0.38
HDHD3-202ENST00000374180 RNASE12Q5GAN4 147 aaKnown RBP12.69□□□□□ -0.38
HDHD3-202ENST00000374180 OVCH2Q7RTZ1 564 aa12.69□□□□□ -0.38
HDHD3-202ENST00000374180 KLHDC1Q8N7A1 406 aa12.69□□□□□ -0.38
HDHD3-202ENST00000374180 Q8N9W7 124 aa12.69□□□□□ -0.38
HDHD3-202ENST00000374180 GIMAP1Q8WWP7 306 aa12.69□□□□□ -0.38
HDHD3-202ENST00000374180 FCAMRQ8WWV6 532 aa12.69□□□□□ -0.38
HDHD3-202ENST00000374180 RBBP9O75884 186 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 PPYP01298 95 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 TNFSF8P32971 234 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 HRH1P35367 487 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 THBS3P49746 956 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 KRTAP10-3P60369 221 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 DYRK1AQ13627 763 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 IL18Q14116 193 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 TMEM95Q3KNT9 176 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 DHRS11Q6UWP2 260 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 OR52I2Q8NH67 350 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 SECTM1Q8WVN6 248 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 C5orf30Q96GV9 206 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 LIN7CQ9NUP9 197 aaKnown RBP12.68□□□□□ -0.38
HDHD3-202ENST00000374180 RABL2AQ9UBK7 228 aaPredicted RBP12.68□□□□□ -0.38
HDHD3-202ENST00000374180 KLK11Q9UBX7 282 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 RABL2BQ9UNT1 228 aa12.68□□□□□ -0.38
HDHD3-202ENST00000374180 NBR2O15453 112 aa12.67□□□□□ -0.38
HDHD3-202ENST00000374180 CNTFRP26992 372 aa12.67□□□□□ -0.38
HDHD3-202ENST00000374180 DUTP33316 252 aaKnown RBP12.67□□□□□ -0.38
HDHD3-202ENST00000374180 TAGLNQ01995 201 aaKnown RBP12.67□□□□□ -0.38
HDHD3-202ENST00000374180 PYHIN1Q6K0P9 492 aa12.67□□□□□ -0.38
HDHD3-202ENST00000374180 PDPNQ86YL7 162 aa12.67□□□□□ -0.38
HDHD3-202ENST00000374180 FAM71E2Q8N5Q1 922 aa12.67□□□□□ -0.38
HDHD3-202ENST00000374180 NPBQ8NG41 125 aa12.67□□□□□ -0.38
HDHD3-202ENST00000374180 ADTRPQ96IZ2 230 aa12.67□□□□□ -0.38
HDHD3-202ENST00000374180 RNF5Q99942 180 aa12.67□□□□□ -0.38
HDHD3-202ENST00000374180 SLC35D1Q9NTN3 355 aa12.67□□□□□ -0.38
HDHD3-202ENST00000374180 KIAA1456Q9P272 454 aa12.67□□□□□ -0.38
HDHD3-202ENST00000374180 GABARAPH6UMI1 98 aa12.66□□□□□ -0.38
HDHD3-202ENST00000374180 IGKV1-16P04430 117 aa12.66□□□□□ -0.38
HDHD3-202ENST00000374180 S100A5P33763 92 aa12.66□□□□□ -0.38
HDHD3-202ENST00000374180 FXYD4P59646 89 aa12.66□□□□□ -0.38
HDHD3-202ENST00000374180 HERV-K104P61576 105 aa12.66□□□□□ -0.38
HDHD3-202ENST00000374180 RPS16P62249 146 aaKnown RBP12.66□□□□□ -0.38
HDHD3-202ENST00000374180 MRPS10P82664 201 aaKnown RBP12.66□□□□□ -0.38
HDHD3-202ENST00000374180 CBX3Q13185 183 aa12.66□□□□□ -0.38
HDHD3-202ENST00000374180 OR6F1Q8NGZ6 308 aa12.66□□□□□ -0.38
HDHD3-202ENST00000374180 FLYWCH2Q96CP2 140 aaKnown RBP12.66□□□□□ -0.38
HDHD3-202ENST00000374180 CITED1Q99966 193 aa12.66□□□□□ -0.38
HDHD3-202ENST00000374180 WNT10AQ9GZT5 417 aa12.66□□□□□ -0.38
HDHD3-202ENST00000374180 SLC5A7Q9GZV3 580 aa12.66□□□□□ -0.38
HDHD3-202ENST00000374180 MTFP1Q9UDX5 166 aa12.66□□□□□ -0.38
HDHD3-202ENST00000374180 RBMX2Q9Y388 322 aaKnown RBP12.66□□□□□ -0.38
HDHD3-202ENST00000374180 FABP12A6NFH5 140 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 IGLV2-14P01704 120 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 IGHG2P01859 326 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 TSPAN5P62079 268 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 RTL8BQ17RB0 113 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 RGS21Q2M5E4 152 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 ZNF660Q6AZW8 331 aaPredicted RBP12.65□□□□□ -0.38
HDHD3-202ENST00000374180 SLC35E3Q7Z769 313 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 CENPVQ7Z7K6 275 aaPredicted RBP12.65□□□□□ -0.38
HDHD3-202ENST00000374180 MINDY2Q8NBR6 621 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 BVESQ8NE79 360 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 ZNF2Q9BSG1 426 aaPredicted RBP12.65□□□□□ -0.38
HDHD3-202ENST00000374180 CCL28Q9NRJ3 127 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 TRRAPQ9Y4A5 3859 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 LINC00473A8K010 186 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 NDUFA3O95167 84 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 RRASP10301 218 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 DGCR2P98153 550 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 C5orf64Q2M2E5 130 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 ACTBL2Q562R1 376 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 LIN54Q6MZP7 749 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 TMEM17Q86X19 198 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 CHPT1Q8WUD6 406 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 TSNAXQ99598 290 aaKnown RBP12.65□□□□□ -0.38
HDHD3-202ENST00000374180 HSD17B10Q99714 261 aaKnown RBP12.65□□□□□ -0.38
HDHD3-202ENST00000374180 PRELID3BQ9Y3B1 194 aa12.65□□□□□ -0.38
HDHD3-202ENST00000374180 hCG_2014768A0A024R1R8 64 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 LINC01548A6NM66 108 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 RRHO14718 337 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 CTDSPLO15194 276 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 KCNAB3O43448 404 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 SSBP1Q04837 148 aaKnown RBP12.64□□□□□ -0.39
HDHD3-202ENST00000374180 PLGLAQ15195 96 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 MSMO1Q15800 293 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 ZNF66Q6ZN08 573 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 KCTD9Q7L273 389 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 FOXRED2Q8IWF2 684 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 C11orf44Q8N8P7 122 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 ZBTB34Q8NCN2 500 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 OR6Q1Q8NGQ2 317 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 SMIM4Q8WVI0 70 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 DDB2Q92466 427 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 SOSTQ9BQB4 213 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 FBXL15Q9H469 300 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 AKIP1Q9NQ31 210 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 TAS2R8Q9NYW2 309 aa12.64□□□□□ -0.39
HDHD3-202ENST00000374180 ZNF107Q9UII5 783 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms