RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 TAF15Q92804 592 aaKnown RBP eCLIP13.09□□□□□ -0.31
TMEM53-203ENST00000372242 MCUBQ9NWR8 336 aa13.09□□□□□ -0.31
TMEM53-203ENST00000372242 LINC00854A0A1B0GVQ3 168 aa13.08□□□□□ -0.32
TMEM53-203ENST00000372242 A6NDX4 124 aa13.08□□□□□ -0.32
TMEM53-203ENST00000372242 TNFSF12O43508 249 aa13.08□□□□□ -0.32
TMEM53-203ENST00000372242 FAM106CPP0CH98 169 aa13.08□□□□□ -0.32
TMEM53-203ENST00000372242 IL7P13232 177 aa13.08□□□□□ -0.32
TMEM53-203ENST00000372242 GNRHRP30968 328 aa13.08□□□□□ -0.32
TMEM53-203ENST00000372242 BCAP31P51572 246 aa13.08□□□□□ -0.32
TMEM53-203ENST00000372242 IFITM3Q01628 133 aa13.08□□□□□ -0.32
TMEM53-203ENST00000372242 OR51S1Q8NGJ8 323 aa13.08□□□□□ -0.32
TMEM53-203ENST00000372242 FAM181BA6NEQ2 426 aa13.07□□□□□ -0.32
TMEM53-203ENST00000372242 LINC00473A8K010 186 aa13.07□□□□□ -0.32
TMEM53-203ENST00000372242 CHST1O43916 411 aa13.07□□□□□ -0.32
TMEM53-203ENST00000372242 GPR137BO60478 399 aa13.07□□□□□ -0.32
TMEM53-203ENST00000372242 SLC22A5O76082 557 aa13.07□□□□□ -0.32
TMEM53-203ENST00000372242 RNASE1P07998 156 aaKnown RBP13.07□□□□□ -0.32
TMEM53-203ENST00000372242 CD1BP29016 333 aa13.07□□□□□ -0.32
TMEM53-203ENST00000372242 INPP1P49441 399 aa13.07□□□□□ -0.32
TMEM53-203ENST00000372242 AP3S2P59780 193 aa13.07□□□□□ -0.32
TMEM53-203ENST00000372242 LHFPL1Q86WI0 220 aa13.07□□□□□ -0.32
TMEM53-203ENST00000372242 HRASLSQ9HDD0 168 aa13.07□□□□□ -0.32
TMEM53-203ENST00000372242 DISC1C4P0D8 188 aa13.06□□□□□ -0.32
TMEM53-203ENST00000372242 H0YJW9 148 aa13.06□□□□□ -0.32
TMEM53-203ENST00000372242 TRIM77I1YAP6 450 aa13.06□□□□□ -0.32
TMEM53-203ENST00000372242 DUTP33316 252 aaKnown RBP13.06□□□□□ -0.32
TMEM53-203ENST00000372242 THNSL2Q86YJ6 484 aa13.06□□□□□ -0.32
TMEM53-203ENST00000372242 OR5AN1Q8NGI8 311 aa13.06□□□□□ -0.32
TMEM53-203ENST00000372242 TERB2Q8NHR7 220 aa13.06□□□□□ -0.32
TMEM53-203ENST00000372242 MRGPRFQ96AM1 343 aa13.06□□□□□ -0.32
TMEM53-203ENST00000372242 EAF1Q96JC9 268 aaPredicted RBP13.06□□□□□ -0.32
TMEM53-203ENST00000372242 C2CD3Q4AC94 2353 aa13.06□□□□□ -0.32
TMEM53-203ENST00000372242 H7C2Y5 167 aa13.06□□□□□ -0.32
TMEM53-203ENST00000372242 TMEM11P17152 192 aa13.06□□□□□ -0.32
TMEM53-203ENST00000372242 RPL30P62888 115 aaKnown RBP13.06□□□□□ -0.32
TMEM53-203ENST00000372242 EIF4EBP1Q13541 118 aaPredicted RBP13.06□□□□□ -0.32
TMEM53-203ENST00000372242 RITA1Q96K30 269 aa13.06□□□□□ -0.32
TMEM53-203ENST00000372242 PITPNC1Q9UKF7 332 aa13.06□□□□□ -0.32
TMEM53-203ENST00000372242 MOSP00540 346 aa13.05□□□□□ -0.32
TMEM53-203ENST00000372242 PI3P19957 117 aa13.05□□□□□ -0.32
TMEM53-203ENST00000372242 EBI3Q14213 229 aa13.05□□□□□ -0.32
TMEM53-203ENST00000372242 PHLDA2Q53GA4 152 aa13.05□□□□□ -0.32
TMEM53-203ENST00000372242 OR2B11Q5JQS5 317 aa13.05□□□□□ -0.32
TMEM53-203ENST00000372242 OR2T10Q8NGZ9 312 aa13.05□□□□□ -0.32
TMEM53-203ENST00000372242 ATRQ13535 2644 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 FBN1P35555 2871 aaKnown RBP13.04□□□□□ -0.32
TMEM53-203ENST00000372242 UPK1BO75841 260 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 IGKV1-16P04430 117 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 PGAM2P15259 253 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 FAUP35544 74 aaKnown RBP13.04□□□□□ -0.32
TMEM53-203ENST00000372242 THBS3P49746 956 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 IDO2Q6ZQW0 420 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 KCTD9Q7L273 389 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 BVESQ8NE79 360 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 MARCH1Q8TCQ1 289 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 DDB2Q92466 427 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 PRRT1Q99946 306 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 SLC25A33Q9BSK2 321 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 CCDC32Q9BV29 185 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 SLC35D1Q9NTN3 355 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 WASHC3Q9Y3C0 194 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 PEX14O75381 377 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 APOA2P02652 100 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 MC5RP33032 325 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 UCP3P55916 312 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 Q8N6K4 173 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 OR13C8Q8NGS7 320 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 TCTEX1D2Q8WW35 142 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 AKR1E2Q96JD6 320 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 RBM14Q96PK6 669 aaKnown RBP13.04□□□□□ -0.32
TMEM53-203ENST00000372242 HSD17B10Q99714 261 aaKnown RBP13.04□□□□□ -0.32
TMEM53-203ENST00000372242 RSRP1Q9BUV0 290 aa13.04□□□□□ -0.32
TMEM53-203ENST00000372242 BOLA2-SMG1P6H3BVE0 249 aa13.03□□□□□ -0.32
TMEM53-203ENST00000372242 GPR31O00270 319 aa13.03□□□□□ -0.32
TMEM53-203ENST00000372242 CNTFRP26992 372 aa13.03□□□□□ -0.32
TMEM53-203ENST00000372242 F2RL1P55085 397 aa13.03□□□□□ -0.32
TMEM53-203ENST00000372242 MSMO1Q15800 293 aa13.03□□□□□ -0.32
TMEM53-203ENST00000372242 LPCAT3Q6P1A2 487 aa13.03□□□□□ -0.32
TMEM53-203ENST00000372242 SLC38A6Q8IZM9 456 aa13.03□□□□□ -0.32
TMEM53-203ENST00000372242 ZBTB34Q8NCN2 500 aa13.03□□□□□ -0.32
TMEM53-203ENST00000372242 OR51H1Q8NH63 302 aa13.03□□□□□ -0.32
TMEM53-203ENST00000372242 ADTRPQ96IZ2 230 aa13.03□□□□□ -0.32
TMEM53-203ENST00000372242 SLC2A8Q9NY64 477 aa13.03□□□□□ -0.32
TMEM53-203ENST00000372242 SCP2D1Q9UJQ7 156 aa13.03□□□□□ -0.32
TMEM53-203ENST00000372242 FCGR3BO75015 233 aa13.02□□□□□ -0.32
TMEM53-203ENST00000372242 PGLYRP1O75594 196 aaPredicted RBP13.02□□□□□ -0.32
TMEM53-203ENST00000372242 OR2F2O95006 317 aa13.02□□□□□ -0.32
TMEM53-203ENST00000372242 RLN1P04808 185 aa13.02□□□□□ -0.32
TMEM53-203ENST00000372242 RIPPLY3P57055 190 aa13.02□□□□□ -0.32
TMEM53-203ENST00000372242 BRWD1-AS2P59051 145 aa13.02□□□□□ -0.32
TMEM53-203ENST00000372242 DHRS7BQ6IAN0 325 aaPredicted RBP13.02□□□□□ -0.32
TMEM53-203ENST00000372242 ZNF66Q6ZN08 573 aa13.02□□□□□ -0.32
TMEM53-203ENST00000372242 LIAT1Q6ZQX7 453 aa13.02□□□□□ -0.32
TMEM53-203ENST00000372242 CMTM1Q8IZ96 169 aa13.02□□□□□ -0.32
TMEM53-203ENST00000372242 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.02□□□□□ -0.32
TMEM53-203ENST00000372242 NEURL2Q9BR09 285 aa13.02□□□□□ -0.32
TMEM53-203ENST00000372242 NCBP2LA6PVI3 153 aaKnown RBP13.02□□□□□ -0.33
TMEM53-203ENST00000372242 PLA2G10O15496 165 aa13.02□□□□□ -0.33
TMEM53-203ENST00000372242 CRYBA1P05813 215 aa13.02□□□□□ -0.33
TMEM53-203ENST00000372242 RELBQ01201 579 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms