RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 GALR2O43603 387 aaPredicted RBP10.11□□□□□ -0.79
PTPN1-201ENST00000371621 ZNF324O75467 553 aaPredicted RBP10.11□□□□□ -0.79
PTPN1-201ENST00000371621 CTSBP07858 339 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 IGHV3-43DP0DP04 118 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 RBX1P62877 108 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 C9orf50Q5SZB4 431 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 FDX2Q6P4F2 183 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 RBMXL3Q8N7X1 1067 aaKnown RBP10.11□□□□□ -0.79
PTPN1-201ENST00000371621 OR8G5Q8NG78 346 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 CPT1CQ8TCG5 803 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 HSD17B10Q99714 261 aaKnown RBP10.11□□□□□ -0.79
PTPN1-201ENST00000371621 IL36RNQ9UBH0 155 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 LSM4Q9Y4Z0 139 aaKnown RBP10.11□□□□□ -0.79
PTPN1-201ENST00000371621 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.11□□□□□ -0.796e-7■■■■■ 41.2
PTPN1-201ENST00000371621 RALGAPA1Q6GYQ0 2036 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 LOC389332A0A1B0GUA5 103 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 hDV102S1A0JD36 115 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 IGLC2P0DOY2 106 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 IGLC3P0DOY3 106 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 IBA57Q5T440 356 aaKnown RBP10.11□□□□□ -0.79
PTPN1-201ENST00000371621 MIC13Q5XKP0 118 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 OR4D5Q8NGN0 318 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 SSBP4Q9BWG4 385 aaPredicted RBP10.11□□□□□ -0.79
PTPN1-201ENST00000371621 TRAV9-2A0A087WT02 112 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 H3BVH4 76 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 FAM87AP0C7U9 286 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 CTGFP29279 349 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 RTL8BQ17RB0 113 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 FBXW9Q5XUX1 488 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 FAM166AQ6J272 317 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 RPP25LQ8N5L8 163 aaKnown RBP10.11□□□□□ -0.79
PTPN1-201ENST00000371621 OR2K2Q8NGT1 345 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 MSI2Q96DH6 328 aaKnown RBP10.11□□□□□ -0.79
PTPN1-201ENST00000371621 CDC42EP3Q9UKI2 254 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 CACNA1BQ00975 2339 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 IGHV2OR16-5A0A0B4J2B6 119 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 OR13H1Q8NG92 308 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 COX14Q96I36 57 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 RNASE7Q9H1E1 156 aaKnown RBP10.1□□□□□ -0.79
PTPN1-201ENST00000371621 K7EQS6 105 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 RBFOX2O43251 390 aaKnown RBP eCLIP10.1□□□□□ -0.794e-7■■■□□ 15.2
PTPN1-201ENST00000371621 SPINT2O43291 252 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 MT-ND6P03923 174 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 GCSAMLQ5JQS6 135 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 SPATA46Q5T0L3 261 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 SFTA2Q6UW10 78 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 OCC1Q8TAD7 63 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 ZNF488Q96MN9 340 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 HLA-DQA1P01909 254 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 TYMSP04818 313 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 LHFPL1Q86WI0 220 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 PLSCR2Q9NRY7 297 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 THYN1Q9P016 225 aa10.1□□□□□ -0.79
PTPN1-201ENST00000371621 THAP10Q9P2Z0 257 aaPredicted RBP10.1□□□□□ -0.79
PTPN1-201ENST00000371621 A0A0G2JMZ2 1700 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 LRRC37A2A6NM11 1700 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 FAM157AC9JC47 383 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 NPY1RP25929 384 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 RHOBP62745 196 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 ARTNQ5T4W7 220 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 FAM162BQ5T6X4 162 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 OR4S2Q8NH73 311 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 SAP30LQ9HAJ7 183 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 OBP2BQ9NPH6 170 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 PLXND1Q9Y4D7 1925 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 PGLYRP1O75594 196 aaPredicted RBP10.09□□□□□ -0.79
PTPN1-201ENST00000371621 VENTXO95231 258 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 ADH4P08319 380 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 SCGB1C2P0DMR2 95 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 GFERP55789 205 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 TFF3Q07654 80 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 OR1C1Q15619 314 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 OR10AG1Q8NH19 301 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 CDH23Q9H251 3354 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 F2Z2F3 143 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 CORTO00230 105 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 FCGR3BO75015 233 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 UBE2NP61088 152 aaKnown RBP10.09□□□□□ -0.79
PTPN1-201ENST00000371621 OR1B1Q8NGR6 318 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 SPPL3Q8TCT6 385 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 TNFRSF14Q92956 283 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 KLHDC3Q9BQ90 382 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 ZNF355PQ9NSJ1 428 aa10.09□□□□□ -0.79
PTPN1-201ENST00000371621 YTHDF2Q9Y5A9 579 aaKnown RBP10.09□□□□□ -0.79
PTPN1-201ENST00000371621 CADP27708 2225 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 KIR2DL5BA0A0G2JN68 375 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 KIR2DL5BA0A0G2JPC4 375 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 A0A0U1RQV5 110 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 ZG16O60844 167 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 GPX1P07203 203 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 LINC00869P0C866 280 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 MAS1LP35410 378 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 GPR3P46089 330 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 ZNF83P51522 516 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 RPL8P62917 257 aaKnown RBP10.08□□□□□ -0.8
PTPN1-201ENST00000371621 PSG9Q00887 426 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 ASPHD2Q6ICH7 369 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 KIR2DL5AQ8N109 375 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 FAM216AQ8WUB2 273 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 PERPQ96FX8 193 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms