RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 PLGRKTQ9HBL7 147 aa10.09□□□□□ -0.79
RPF1-201ENST00000370654 TENM2Q9NT68 2774 aa10.09□□□□□ -0.79
RPF1-201ENST00000370654 RDH8Q9NYR8 311 aa10.09□□□□□ -0.79
RPF1-201ENST00000370654 STARD9Q9P2P6 4700 aa10.09□□□□□ -0.79
RPF1-201ENST00000370654 TMEM272A0A1B0GTI8 110 aa10.08□□□□□ -0.8
RPF1-201ENST00000370654 SRRM4A7MD48 611 aaKnown RBP10.08□□□□□ -0.8
RPF1-201ENST00000370654 TRDCB7Z8K6 153 aa10.08□□□□□ -0.8
RPF1-201ENST00000370654 M0R1X1 148 aa10.08□□□□□ -0.8
RPF1-201ENST00000370654 TRGV3P03979 118 aa10.08□□□□□ -0.8
RPF1-201ENST00000370654 TMEM267Q0VDI3 215 aaPredicted RBP10.08□□□□□ -0.8
RPF1-201ENST00000370654 FXYD3Q14802 87 aa10.08□□□□□ -0.8
RPF1-201ENST00000370654 RAB11BQ15907 218 aa10.08□□□□□ -0.8
RPF1-201ENST00000370654 IGSF11Q5DX21 431 aa10.08□□□□□ -0.8
RPF1-201ENST00000370654 HES5Q5TA89 166 aa10.08□□□□□ -0.8
RPF1-201ENST00000370654 IL34Q6ZMJ4 242 aa10.08□□□□□ -0.8
RPF1-201ENST00000370654 TCTEX1D1Q8N7M0 179 aa10.08□□□□□ -0.8
RPF1-201ENST00000370654 FAM3DQ96BQ1 224 aa10.08□□□□□ -0.8
RPF1-201ENST00000370654 RNF5Q99942 180 aa10.08□□□□□ -0.8
RPF1-201ENST00000370654 CMSS1Q9BQ75 279 aaKnown RBP10.08□□□□□ -0.8
RPF1-201ENST00000370654 URM1Q9BTM9 101 aaKnown RBP10.08□□□□□ -0.8
RPF1-201ENST00000370654 RIMS4Q9H426 269 aaPredicted RBP10.08□□□□□ -0.8
RPF1-201ENST00000370654 C12orf4Q9NQ89 552 aa10.08□□□□□ -0.8
RPF1-201ENST00000370654 ANKRD34BA5PLL1 514 aa10.07□□□□□ -0.8
RPF1-201ENST00000370654 TRBV12-3P01733 135 aa10.07□□□□□ -0.8
RPF1-201ENST00000370654 TFAP2AP05549 437 aa10.07□□□□□ -0.8
RPF1-201ENST00000370654 OR8U9P0C7N5 309 aa10.07□□□□□ -0.8
RPF1-201ENST00000370654 GSTT2P0CG29 244 aa10.07□□□□□ -0.8
RPF1-201ENST00000370654 GSTT2BP0CG30 244 aa10.07□□□□□ -0.8
RPF1-201ENST00000370654 CALRP27797 417 aaKnown RBP10.07□□□□□ -0.8
RPF1-201ENST00000370654 OR10A3P58181 314 aa10.07□□□□□ -0.8
RPF1-201ENST00000370654 PITPNAQ00169 270 aa10.07□□□□□ -0.8
RPF1-201ENST00000370654 MUC7Q8TAX7 377 aa10.07□□□□□ -0.8
RPF1-201ENST00000370654 EDARADDQ8WWZ3 215 aa10.07□□□□□ -0.8
RPF1-201ENST00000370654 SDHAF2Q9NX18 166 aa10.07□□□□□ -0.8
RPF1-201ENST00000370654 SCN3BQ9NY72 215 aa10.07□□□□□ -0.8
RPF1-201ENST00000370654 ZNF230Q9UIE0 474 aaPredicted RBP10.07□□□□□ -0.8
RPF1-201ENST00000370654 ZNF221Q9UK13 617 aa10.07□□□□□ -0.8
RPF1-201ENST00000370654 IGKV1D-8A0A087WSZ0 117 aa10.06□□□□□ -0.8
RPF1-201ENST00000370654 A0A0B4J203 849 aa10.06□□□□□ -0.8
RPF1-201ENST00000370654 APELAP0DMC3 54 aa10.06□□□□□ -0.8
RPF1-201ENST00000370654 PYHIN1Q6K0P9 492 aa10.06□□□□□ -0.8
RPF1-201ENST00000370654 PDPNQ86YL7 162 aa10.06□□□□□ -0.8
RPF1-201ENST00000370654 POC5Q8NA72 575 aa10.06□□□□□ -0.8
RPF1-201ENST00000370654 OR6Q1Q8NGQ2 317 aa10.06□□□□□ -0.8
RPF1-201ENST00000370654 FLYWCH2Q96CP2 140 aaKnown RBP10.06□□□□□ -0.8
RPF1-201ENST00000370654 TSNAXQ99598 290 aaKnown RBP10.06□□□□□ -0.8
RPF1-201ENST00000370654 GHITMQ9H3K2 345 aa10.06□□□□□ -0.8
RPF1-201ENST00000370654 ZNF355PQ9NSJ1 428 aa10.06□□□□□ -0.8
RPF1-201ENST00000370654 SLC35D1Q9NTN3 355 aa10.06□□□□□ -0.8
RPF1-201ENST00000370654 ELF5Q9UKW6 265 aaPredicted RBP10.06□□□□□ -0.8
RPF1-201ENST00000370654 BET1O15155 118 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 FABP7O15540 132 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 DENRO43583 198 aaKnown RBP10.05□□□□□ -0.8
RPF1-201ENST00000370654 RGS10O43665 173 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 SPDEFO95238 335 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 IGLV1-51P01701 117 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 FCGR3AP08637 254 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 IGHV4-30-4P0DP06 118 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 GNB3P16520 340 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 MLLT11Q13015 90 aaPredicted RBP10.05□□□□□ -0.8
RPF1-201ENST00000370654 SSX1Q16384 188 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 BVESQ8NE79 360 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 OR4C12Q96R67 309 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 RSRP1Q9BUV0 290 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 OR2D2Q9H210 308 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 SLA2Q9H6Q3 261 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 V9GY05 133 aa10.05□□□□□ -0.8
RPF1-201ENST00000370654 CRHBPP24387 322 aa10.04□□□□□ -0.8
RPF1-201ENST00000370654 KLF5Q13887 457 aaPredicted RBP10.04□□□□□ -0.8
RPF1-201ENST00000370654 OR56B1Q8NGI3 324 aa10.04□□□□□ -0.8
RPF1-201ENST00000370654 OR4A4PQ8NGN8 299 aa10.04□□□□□ -0.8
RPF1-201ENST00000370654 MGLLQ99685 303 aa10.04□□□□□ -0.8
RPF1-201ENST00000370654 TM2D3Q9BRN9 247 aa10.04□□□□□ -0.8
RPF1-201ENST00000370654 CABLES2Q9BTV7 478 aa10.04□□□□□ -0.8
RPF1-201ENST00000370654 CCDC90BQ9GZT6 254 aa10.04□□□□□ -0.8
RPF1-201ENST00000370654 C19orf73Q9NVV2 129 aa10.04□□□□□ -0.8
RPF1-201ENST00000370654 MGAT4AQ9UM21 535 aa10.04□□□□□ -0.8
RPF1-201ENST00000370654 A0A075B6Q4 140 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 TRBV6-7A0A0A0MS04 114 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 IZUMO1RA6ND01 250 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 RAB27BO00194 218 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 MFNGO00587 321 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 ARL6IP5O75915 188 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 CNIH1O95406 144 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 APOA2P02652 100 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 SYNJ2BPP57105 145 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 DYRK1AQ13627 763 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 ZFAND6Q6FIF0 208 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 NR2C2APQ86WQ0 139 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.03□□□□□ -0.8
RPF1-201ENST00000370654 DDB2Q92466 427 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 RAB3CQ96E17 227 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 HARBI1Q96MB7 349 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 VCXQ9H320 206 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 RANGRFQ9HD47 186 aaPredicted RBP10.03□□□□□ -0.8
RPF1-201ENST00000370654 RAB22AQ9UL26 194 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 TPRKBQ9Y3C4 175 aa10.03□□□□□ -0.8
RPF1-201ENST00000370654 EPPK1P58107 5090 aaKnown RBP10.03□□□□□ -0.8
RPF1-201ENST00000370654 C13orf42A0A1B0GVH6 325 aa10.02□□□□□ -0.8
RPF1-201ENST00000370654 SMIM30A4D0T7 59 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms