RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 RASL11BQ9BPW5 248 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 SLC35D1Q9NTN3 355 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 LIN7CQ9NUP9 197 aaKnown RBP11.8□□□□□ -0.52
COL9A1-204ENST00000370496 GAB2Q9UQC2 676 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 A3GALT2U3KPV4 340 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 NBR2O15453 112 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 PROP1O75360 226 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 VSIG10L2P0DP72 767 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 TSPAN5P62079 268 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 RTL8BQ17RB0 113 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 FOXB2Q5VYV0 432 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 KCTD9Q7L273 389 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 Q8N9W7 124 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 SMIM4Q8WVI0 70 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 ZNF2Q9BSG1 426 aaPredicted RBP11.79□□□□□ -0.52
COL9A1-204ENST00000370496 ZNF747Q9BV97 191 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 SLC5A7Q9GZV3 580 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 KLK11Q9UBX7 282 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 MTFP1Q9UDX5 166 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 RBMX2Q9Y388 322 aaKnown RBP11.79□□□□□ -0.52
COL9A1-204ENST00000370496 TENM1Q9UKZ4 2725 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 ANK2Q01484 3957 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 FABP12A6NFH5 140 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 M0QYG6 137 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 TBPP20226 339 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 DUTP33316 252 aaKnown RBP11.79□□□□□ -0.52
COL9A1-204ENST00000370496 F2RL1P55085 397 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 LINC00205P59089 165 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 TAGLNQ01995 201 aaKnown RBP11.79□□□□□ -0.52
COL9A1-204ENST00000370496 PLGLAQ15195 96 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 RNASE10Q5GAN6 216 aaKnown RBP11.79□□□□□ -0.52
COL9A1-204ENST00000370496 SHISA2Q6UWI4 295 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 LYSMD2Q8IV50 215 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 OR6F1Q8NGZ6 308 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 GIMAP1Q8WWP7 306 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 BORCS5Q969J3 196 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 FXYD6Q9H0Q3 95 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 SERTAD4Q9NUC0 356 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 TAS2R8Q9NYW2 309 aa11.79□□□□□ -0.52
COL9A1-204ENST00000370496 CTDSPLO15194 276 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 IGKV1-16P04430 117 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 IFNA6P05013 189 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 CNTFRP26992 372 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 TAS2R19P59542 299 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 RPS16P62249 146 aaKnown RBP11.78□□□□□ -0.52
COL9A1-204ENST00000370496 SSBP1Q04837 148 aaKnown RBP11.78□□□□□ -0.52
COL9A1-204ENST00000370496 OR2B11Q5JQS5 317 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 SLC35E3Q7Z769 313 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 FAM71E2Q8N5Q1 922 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 BVESQ8NE79 360 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 TCTEX1D2Q8WW35 142 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 MOB3AQ96BX8 217 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 FLYWCH2Q96CP2 140 aaKnown RBP11.78□□□□□ -0.52
COL9A1-204ENST00000370496 RITA1Q96K30 269 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 HARBI1Q96MB7 349 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 TSNAXQ99598 290 aaKnown RBP11.78□□□□□ -0.52
COL9A1-204ENST00000370496 HSD17B10Q99714 261 aaKnown RBP11.78□□□□□ -0.52
COL9A1-204ENST00000370496 CCL28Q9NRJ3 127 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 PLSCR3Q9NRY6 295 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 PRELID3BQ9Y3B1 194 aa11.78□□□□□ -0.52
COL9A1-204ENST00000370496 KCNAB3O43448 404 aa11.77□□□□□ -0.53
COL9A1-204ENST00000370496 TNFSF12O43508 249 aa11.77□□□□□ -0.53
COL9A1-204ENST00000370496 IGLV2-14P01704 120 aa11.77□□□□□ -0.53
COL9A1-204ENST00000370496 CD3DP04234 171 aa11.77□□□□□ -0.53
COL9A1-204ENST00000370496 CSF1P09603 554 aa11.77□□□□□ -0.53
COL9A1-204ENST00000370496 RRASP10301 218 aa11.77□□□□□ -0.53
COL9A1-204ENST00000370496 MSMO1Q15800 293 aa11.77□□□□□ -0.53
COL9A1-204ENST00000370496 SPANXN2Q5MJ10 180 aa11.77□□□□□ -0.53
COL9A1-204ENST00000370496 VAX1Q5SQQ9 334 aa11.77□□□□□ -0.53
COL9A1-204ENST00000370496 FOXRED2Q8IWF2 684 aa11.77□□□□□ -0.53
COL9A1-204ENST00000370496 LINC00473A8K010 186 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 RRHO14718 337 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 SHOXO15266 292 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 FCGR3BO75015 233 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 NDUFA3O95167 84 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 SPDEFO95238 335 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 CRYZL1O95825 349 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 SRSF4Q08170 494 aaKnown RBP11.76□□□□□ -0.53
COL9A1-204ENST00000370496 CATR1Q13166 79 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 C5orf64Q2M2E5 130 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 PYDC2Q56P42 97 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 ZNF660Q6AZW8 331 aaPredicted RBP11.76□□□□□ -0.53
COL9A1-204ENST00000370496 DHRS11Q6UWP2 260 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 ZNF66Q6ZN08 573 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 TMEM229BQ8NBD8 167 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 ZBTB34Q8NCN2 500 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 NPBQ8NG41 125 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 DDB2Q92466 427 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 RNF5Q99942 180 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 TINAGL1Q9GZM7 467 aaPredicted RBP11.76□□□□□ -0.53
COL9A1-204ENST00000370496 FBXL15Q9H469 300 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 METTL1Q9UBP6 276 aaKnown RBP11.76□□□□□ -0.53
COL9A1-204ENST00000370496 ZNF107Q9UII5 783 aaPredicted RBP11.76□□□□□ -0.53
COL9A1-204ENST00000370496 V9GYH0 126 aa11.76□□□□□ -0.53
COL9A1-204ENST00000370496 RAB3DO95716 219 aa11.75□□□□□ -0.53
COL9A1-204ENST00000370496 IGHG2P01859 326 aa11.75□□□□□ -0.53
COL9A1-204ENST00000370496 AADACL3Q5VUY0 350 aa11.75□□□□□ -0.53
COL9A1-204ENST00000370496 STEAP1BQ6NZ63 245 aa11.75□□□□□ -0.53
COL9A1-204ENST00000370496 ZNF818PQ6ZRF7 136 aa11.75□□□□□ -0.53
COL9A1-204ENST00000370496 ARRDC1Q8N5I2 433 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms