RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PITPNC1Q9UKF7 332 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 LINC00473A8K010 186 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 H0YJW9 148 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 PEX14O75381 377 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 MOSP00540 346 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 APOA2P02652 100 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 IL7P13232 177 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 DUTP33316 252 aaKnown RBP11.12□□□□□ -0.63
TPM3-211ENST00000368531 FAUP35544 74 aaKnown RBP11.12□□□□□ -0.63
TPM3-211ENST00000368531 THBS3P49746 956 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 RPL30P62888 115 aaKnown RBP11.12□□□□□ -0.63
TPM3-211ENST00000368531 HABP2Q14520 560 aaPredicted RBP11.12□□□□□ -0.63
TPM3-211ENST00000368531 PHLDA2Q53GA4 152 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 AADACL3Q5VUY0 350 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 DHRS7BQ6IAN0 325 aaPredicted RBP11.12□□□□□ -0.63
TPM3-211ENST00000368531 BVESQ8NE79 360 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 TERB2Q8NHR7 220 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 TCTEX1D2Q8WW35 142 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 RITA1Q96K30 269 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 WDR12Q9GZL7 423 aaKnown RBP11.12□□□□□ -0.63
TPM3-211ENST00000368531 SLC35D1Q9NTN3 355 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 WASHC3Q9Y3C0 194 aa11.12□□□□□ -0.63
TPM3-211ENST00000368531 NCBP2LA6PVI3 153 aaKnown RBP11.11□□□□□ -0.63
TPM3-211ENST00000368531 PI3P19957 117 aa11.11□□□□□ -0.63
TPM3-211ENST00000368531 MC5RP33032 325 aa11.11□□□□□ -0.63
TPM3-211ENST00000368531 RIPPLY3P57055 190 aa11.11□□□□□ -0.63
TPM3-211ENST00000368531 KCTD9Q7L273 389 aa11.11□□□□□ -0.63
TPM3-211ENST00000368531 LHFPL1Q86WI0 220 aa11.11□□□□□ -0.63
TPM3-211ENST00000368531 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.11□□□□□ -0.63
TPM3-211ENST00000368531 OR5AN1Q8NGI8 311 aa11.11□□□□□ -0.63
TPM3-211ENST00000368531 MARCH1Q8TCQ1 289 aa11.11□□□□□ -0.63
TPM3-211ENST00000368531 ADTRPQ96IZ2 230 aa11.11□□□□□ -0.63
TPM3-211ENST00000368531 RBM14Q96PK6 669 aaKnown RBP11.11□□□□□ -0.63
TPM3-211ENST00000368531 SH2D7A6NKC9 451 aaPredicted RBP11.1□□□□□ -0.63
TPM3-211ENST00000368531 GPR31O00270 319 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 FCGR3BO75015 233 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 OR2F2O95006 317 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 CNTFRP26992 372 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 F2RL1P55085 397 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 UCP3P55916 312 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 RPS16P62249 146 aaKnown RBP11.1□□□□□ -0.63
TPM3-211ENST00000368531 EBI3Q14213 229 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 KRTAP24-1Q3LI83 254 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 LPCAT3Q6P1A2 487 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 IDO2Q6ZQW0 420 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 ZBTB34Q8NCN2 500 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 OR51H1Q8NH63 302 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 BORCS5Q969J3 196 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 AKR1E2Q96JD6 320 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 HSD17B10Q99714 261 aaKnown RBP11.1□□□□□ -0.63
TPM3-211ENST00000368531 PRRT1Q99946 306 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 RSRP1Q9BUV0 290 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 SCP2D1Q9UJQ7 156 aa11.1□□□□□ -0.63
TPM3-211ENST00000368531 MXRA5Q9NR99 2828 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 PGLYRP1O75594 196 aaPredicted RBP11.09□□□□□ -0.63
TPM3-211ENST00000368531 IGKV1-16P04430 117 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 RLN1P04808 185 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 CD40LGP29965 261 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 EIF4EBP1Q13541 118 aaPredicted RBP11.09□□□□□ -0.63
TPM3-211ENST00000368531 MMDQ15546 238 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 RTL8BQ17RB0 113 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 ABCA11PQ4W5N1 156 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 ZNF66Q6ZN08 573 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 LIAT1Q6ZQX7 453 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 CMTM1Q8IZ96 169 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 SLC38A6Q8IZM9 456 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 Q8N6K4 173 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 OR13C8Q8NGS7 320 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 DDB2Q92466 427 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 MRGPRFQ96AM1 343 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 FLYWCH2Q96CP2 140 aaKnown RBP11.09□□□□□ -0.63
TPM3-211ENST00000368531 CCDC32Q9BV29 185 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 RAB18Q9NP72 206 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 C1RLQ9NZP8 487 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 MOB4Q9Y3A3 225 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 PRELID3BQ9Y3B1 194 aa11.09□□□□□ -0.63
TPM3-211ENST00000368531 SHOXO15266 292 aa11.08□□□□□ -0.64
TPM3-211ENST00000368531 CRYZL1O95825 349 aa11.08□□□□□ -0.64
TPM3-211ENST00000368531 S100GP29377 79 aa11.08□□□□□ -0.64
TPM3-211ENST00000368531 BLCAPP62952 87 aa11.08□□□□□ -0.64
TPM3-211ENST00000368531 CATR1Q13166 79 aa11.08□□□□□ -0.64
TPM3-211ENST00000368531 CBX3Q13185 183 aa11.08□□□□□ -0.64
TPM3-211ENST00000368531 MSMO1Q15800 293 aa11.08□□□□□ -0.64
TPM3-211ENST00000368531 C9orf152Q5JTZ5 239 aa11.08□□□□□ -0.64
TPM3-211ENST00000368531 Q6ZS46 218 aa11.08□□□□□ -0.64
TPM3-211ENST00000368531 PDPNQ86YL7 162 aa11.08□□□□□ -0.64
TPM3-211ENST00000368531 ZFAND1Q8TCF1 268 aa11.08□□□□□ -0.64
TPM3-211ENST00000368531 NPFFR1Q9GZQ6 430 aa11.08□□□□□ -0.64
TPM3-211ENST00000368531 CENPXA8MT69 81 aa11.07□□□□□ -0.64
TPM3-211ENST00000368531 RNF212BA8MTL3 300 aa11.07□□□□□ -0.64
TPM3-211ENST00000368531 RRASP10301 218 aa11.07□□□□□ -0.64
TPM3-211ENST00000368531 CCR6P51684 374 aa11.07□□□□□ -0.64
TPM3-211ENST00000368531 PIGPP57054 158 aa11.07□□□□□ -0.64
TPM3-211ENST00000368531 RELBQ01201 579 aa11.07□□□□□ -0.64
TPM3-211ENST00000368531 TAGLNQ01995 201 aaKnown RBP11.07□□□□□ -0.64
TPM3-211ENST00000368531 ARSJQ5FYB0 599 aaPredicted RBP11.07□□□□□ -0.64
TPM3-211ENST00000368531 C16orf82Q7Z2V1 217 aa11.07□□□□□ -0.64
TPM3-211ENST00000368531 TBC1D26Q86UD7 250 aa11.07□□□□□ -0.64
TPM3-211ENST00000368531 SPAG16Q8N0X2 631 aa11.07□□□□□ -0.64
TPM3-211ENST00000368531 ZFAND2BQ8WV99 257 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms