RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 SPTBP11277 2137 aa-0.91□□□□□ -2.56
MIR539-201ENST00000365690 RBBP6Q7Z6E9 1792 aaKnown RBP-0.91□□□□□ -2.56
MIR539-201ENST00000365690 FANCMQ8IYD8 2048 aa-0.91□□□□□ -2.56
MIR539-201ENST00000365690 SCN3AQ9NY46 2000 aa-0.91□□□□□ -2.56
MIR539-201ENST00000365690 COL4A5P29400 1685 aa-0.91□□□□□ -2.56
MIR539-201ENST00000365690 RYR1P21817 5038 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 POLQO75417 2590 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 A0A087WUU8 490 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 TRBV9A0A0B4J1U6 114 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 IGHV2OR16-5A0A0B4J2B6 119 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 RNF103-CHMP3A0A140T963 221 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 BOLA2-SMG1P6H3BVE0 249 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 K7EQM0 130 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 PIRO00625 290 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 CCL16O15467 120 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 STK16O75716 305 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 KLK1P06870 262 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 CLTAP09496 248 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 TFPTP0C1Z6 253 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 GFAPP14136 432 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 HLA-DPA1P20036 260 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 IVDP26440 423 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 CD82P27701 267 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 RABIFP47224 123 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 CDK9P50750 372 aaKnown RBP-0.92□□□□□ -2.56
MIR539-201ENST00000365690 STC1P52823 247 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 FXYD2P54710 66 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 FXYD4P59646 89 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 RAB10P61026 200 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 FGF12P61328 243 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 RHOAP61586 193 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 RHOGP84095 191 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 RPL18AQ02543 176 aaKnown RBP-0.92□□□□□ -2.56
MIR539-201ENST00000365690 STX5Q13190 355 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 SELENBP1Q13228 472 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 TAF7Q15545 349 aaPredicted RBP-0.92□□□□□ -2.56
MIR539-201ENST00000365690 ACSM3Q53FZ2 586 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 IBA57Q5T440 356 aaKnown RBP-0.92□□□□□ -2.56
MIR539-201ENST00000365690 CASC1Q6TDU7 716 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 BAP18Q8IXM2 172 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 Q8IZM0 81 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 OR51H1Q8NH63 302 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 NAT14Q8WUY8 206 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 PIH1D2Q8WWB5 315 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 TMEM234Q8WY98 164 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 TFGQ92734 400 aaPredicted RBP-0.92□□□□□ -2.56
MIR539-201ENST00000365690 XPO6Q96QU8 1125 aaKnown RBP-0.92□□□□□ -2.56
MIR539-201ENST00000365690 OR7D2Q96RA2 312 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 WFDC10AQ9H1F0 79 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 SLC38A1Q9H2H9 487 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 MIXL1Q9H2W2 232 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 MYH16Q9H6N6 1097 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 RMND5AQ9H871 391 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 RAB20Q9NX57 234 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 ADA2Q9NZK5 511 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 POLR1DQ9Y2S0 133 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 TBL2Q9Y4P3 447 aaKnown RBP-0.92□□□□□ -2.56
MIR539-201ENST00000365690 BCL9O00512 1426 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 HIVEP1P15822 2718 aa-0.92□□□□□ -2.56
MIR539-201ENST00000365690 LAMC1P11047 1609 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 MED13LQ71F56 2210 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 KBTBD11-OT1A0A1B0GTJ5 212 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 FAM240AA0A1B0GVK7 77 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 PRORSD1PA6NEY8 169 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 TRIM64CA6NLI5 447 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 HMGB1P1B2RPK0 211 aaPredicted RBP-0.93□□□□□ -2.56
MIR539-201ENST00000365690 TMEM250H0YL14 139 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 M0R3E3 92 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 DFFAO00273 331 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 FGF16O43320 207 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 SULT1B1O43704 296 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 MPDU1O75352 247 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 FCN3O75636 299 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 UBL3O95164 117 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 CD160O95971 181 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 GCGP01275 180 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 IL6P05231 212 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 MSMBP08118 114 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 KRT16P08779 473 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 SLC2A1P11166 492 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 ORM2P19652 201 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 FKBP2P26885 142 aaKnown RBP-0.93□□□□□ -2.56
MIR539-201ENST00000365690 CD86P42081 329 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 MRPL19P49406 292 aaKnown RBP-0.93□□□□□ -2.56
MIR539-201ENST00000365690 EIF2B2P49770 351 aaKnown RBP-0.93□□□□□ -2.56
MIR539-201ENST00000365690 AQP5P55064 265 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 PAFAH1B2P68402 229 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 BST2Q10589 180 aaKnown RBP-0.93□□□□□ -2.56
MIR539-201ENST00000365690 TOMM34Q15785 309 aaPredicted RBP-0.93□□□□□ -2.56
MIR539-201ENST00000365690 TBC1D28Q2M2D7 210 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 RNASE10Q5GAN6 216 aaKnown RBP-0.93□□□□□ -2.56
MIR539-201ENST00000365690 SPANXN5Q5MJ07 72 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 CTSL3PQ5NE16 218 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 SYT6Q5T7P8 510 aaPredicted RBP-0.93□□□□□ -2.56
MIR539-201ENST00000365690 SLC8B1Q6J4K2 584 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 LCN15Q6UWW0 184 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 ZNF826PQ6ZT77 177 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 ZGRF1Q86YA3 2104 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 NELFCDQ8IXH7 590 aa-0.93□□□□□ -2.56
MIR539-201ENST00000365690 PACRGLQ8N7B6 248 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms