RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 GABRA2P47869 451 aa0.38□□□□□ -2.35
RNU6-553P-201ENST00000364047 CDK9P50750 372 aaKnown RBP0.38□□□□□ -2.35
RNU6-553P-201ENST00000364047 PSMD7P51665 324 aa0.38□□□□□ -2.35
RNU6-553P-201ENST00000364047 AQP4P55087 323 aa0.38□□□□□ -2.35
RNU6-553P-201ENST00000364047 HERVK_113P63121 156 aa0.38□□□□□ -2.35
RNU6-553P-201ENST00000364047 XIAPP98170 497 aa0.38□□□□□ -2.35
RNU6-553P-201ENST00000364047 KRTAP21-1Q3LI58 79 aa0.38□□□□□ -2.35
RNU6-553P-201ENST00000364047 ZNF705AQ6ZN79 300 aaPredicted RBP0.38□□□□□ -2.35
RNU6-553P-201ENST00000364047 ST13P4Q8IZP2 240 aaPredicted RBP0.38□□□□□ -2.35
RNU6-553P-201ENST00000364047 NATD1Q8N6N6 113 aa0.38□□□□□ -2.35
RNU6-553P-201ENST00000364047 GNB1LQ9BYB4 327 aa0.38□□□□□ -2.35
RNU6-553P-201ENST00000364047 EIF5A2Q9GZV4 153 aaKnown RBP0.38□□□□□ -2.35
RNU6-553P-201ENST00000364047 TRAPPC13A5PLN9 417 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 MRASO14807 208 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 SCN2BO60939 215 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 CST4P01036 141 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 NPPAP01160 153 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 LIMS3P0CW19 117 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 LIMS4P0CW20 117 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 RPL27AP46776 148 aaKnown RBP0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 TNNC1P63316 161 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 ELOBQ15370 118 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 TMEM249Q2WGJ8 235 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 MESTQ5EB52 335 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 SCGB1D4Q6XE38 83 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 ATP5L2Q7Z4Y8 100 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 LRRC20Q8TCA0 184 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 OR7D2Q96RA2 312 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 TMEM222Q9H0R3 208 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 TIMM9Q9Y5J7 89 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 CUL9Q8IWT3 2517 aa0.37□□□□□ -2.35
RNU6-553P-201ENST00000364047 IGHV1-18A0A0C4DH31 117 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 HBZP02008 142 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 EVX1P49640 407 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 DAD1P61803 113 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 ARHGAP11BQ3KRB8 267 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 FAM19A2Q8N3H0 131 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 PACRGLQ8N7B6 248 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 PPWD1Q96BP3 646 aaKnown RBP0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 TMA16Q96EY4 203 aaKnown RBP0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 SFRP2Q96HF1 295 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 TMEM56Q96MV1 263 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 FAM210AQ96ND0 272 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 HBEGFQ99075 208 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 TTTY13Q9BZ97 58 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 ENPP5Q9UJA9 477 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 POLR3HQ9Y535 204 aaPredicted RBP0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 MICAL3Q7RTP6 2002 aa0.36□□□□□ -2.35
RNU6-553P-201ENST00000364047 LIN7AO14910 233 aaPredicted RBP0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 SGCEO43556 437 aa0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 ORC5O43913 435 aa0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 CRATP43155 626 aa0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 EMP1P54849 157 aa0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 BTN3A2P78410 334 aa0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 MIAQ16674 131 aa0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 SPATA31B1PQ5VZV4 182 aa0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 FAM173BQ6P4H8 233 aa0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 LRRC34Q8IZ02 419 aa0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 OR13C8Q8NGS7 320 aa0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 CCDC12Q8WUD4 166 aaPredicted RBP0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 CPNE2Q96FN4 548 aaPredicted RBP0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 MRM2Q9UI43 246 aaKnown RBP0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 KIAA2026Q5HYC2 2103 aa0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 TECTAO75443 2155 aa0.35□□□□□ -2.35
RNU6-553P-201ENST00000364047 A0A0D9SEW6 157 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 F5H5K5 113 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 PSMB8P28062 276 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 CARD18P57730 90 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 TPI1P60174 286 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 RAB8AP61006 207 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 NPATQ14207 1427 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 USF2Q15853 346 aaPredicted RBP0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 EXOC3L4Q17RC7 722 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 BAP18Q8IXM2 172 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 C1orf174Q8IYL3 243 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 ZNF675Q8TD23 568 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 RORBQ92753 470 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 IMMP2LQ96T52 175 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 MUC5ACP98088 5654 aa0.34□□□□□ -2.36
RNU6-553P-201ENST00000364047 H7C2G1 150 aa0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 SULT1C2O00338 296 aa0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 COPEO14579 308 aa0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 GEMIN2O14893 280 aaKnown RBP0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 TNFAIP8O95379 198 aa0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 DEFA4P12838 97 aa0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 CCL2P13500 99 aa0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 CA5AP35218 305 aa0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 NUP62P37198 522 aaPredicted RBP0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 FXYD7P58549 80 aa0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 DYNAPQ8N1N2 210 aa0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 RNASE6Q93091 150 aaKnown RBP0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 NMNAT3Q96T66 252 aa0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 RBM7Q9Y580 266 aaKnown RBP0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 SNURFQ9Y675 71 aa0.33□□□□□ -2.36
RNU6-553P-201ENST00000364047 KIAA0232Q92628 1395 aa0.32□□□□□ -2.36
RNU6-553P-201ENST00000364047 NUMA1Q14980 2115 aa0.32□□□□□ -2.36
RNU6-553P-201ENST00000364047 FREM1Q5H8C1 2179 aa0.32□□□□□ -2.36
RNU6-553P-201ENST00000364047 TRAV7A0A075B6U4 112 aa0.32□□□□□ -2.36
RNU6-553P-201ENST00000364047 A0A087WUU8 490 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms