RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 IGHV2-26A0A0B4J1V2 119 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 PAX2Q02962 417 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 PRB3Q04118 309 aaPredicted RBP18.9■□□□□ 0.62
SDF4-202ENST00000360001 TMEM65Q6PI78 240 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 OR10X1Q8NGY0 326 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 THAP6Q8TBB0 222 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 CD300LFQ8TDQ1 290 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 GPR146Q96CH1 333 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 SPIN2AQ99865 258 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 SPIN2BQ9BPZ2 258 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 M0R1W7 72 aa18.89■□□□□ 0.61
SDF4-202ENST00000360001 ARPC5O15511 151 aa18.89■□□□□ 0.61
SDF4-202ENST00000360001 FCGR3BO75015 233 aa18.89■□□□□ 0.61
SDF4-202ENST00000360001 CXCL2P19875 107 aa18.89■□□□□ 0.61
SDF4-202ENST00000360001 THBS3P49746 956 aa18.89■□□□□ 0.61
SDF4-202ENST00000360001 LCN2P80188 198 aa18.89■□□□□ 0.61
SDF4-202ENST00000360001 ZNF383Q8NA42 475 aa18.89■□□□□ 0.61
SDF4-202ENST00000360001 PRELID3BQ9Y3B1 194 aa18.89■□□□□ 0.61
SDF4-202ENST00000360001 MED13LQ71F56 2210 aa18.89■□□□□ 0.61
SDF4-202ENST00000360001 VPS13CQ709C8 3753 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 IGHV4-30-2A0A087WSY4 118 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 MBPP02686 304 aaPredicted RBP18.88■□□□□ 0.61
SDF4-202ENST00000360001 AKR1C2P52895 323 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 ZNF546Q86UE3 836 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 ST6GALNAC6Q969X2 333 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 MARVELD3Q96A59 401 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 ADTRPQ96IZ2 230 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 IGHV4-61A0A0C4DH41 118 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 RBFOX2O43251 390 aaKnown RBP eCLIP18.88■□□□□ 0.612e-6■■□□□ 13.5
SDF4-202ENST00000360001 IGLV1-47P01700 117 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 CT45A6P0DMU7 189 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 CT45A5P0DMU8 189 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 CT45A7P0DMV0 189 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 LYL1P12980 280 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 ZNF137PP52743 207 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 S100A10P60903 97 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 IZUMO4Q1ZYL8 232 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 Q6ZRM9 215 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 TNFRSF14Q92956 283 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 CLEC7AQ9BXN2 247 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 OR5AC2Q9NZP5 309 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 POLQO75417 2590 aa18.88■□□□□ 0.61
SDF4-202ENST00000360001 ANKRD17O75179 2603 aaKnown RBP18.87■□□□□ 0.61
SDF4-202ENST00000360001 ENSAO43768 121 aaKnown RBP18.87■□□□□ 0.61
SDF4-202ENST00000360001 SLC25A6P12236 298 aa18.87■□□□□ 0.61
SDF4-202ENST00000360001 KIR2DS2P43631 304 aa18.87■□□□□ 0.61
SDF4-202ENST00000360001 PRSS54Q6PEW0 395 aa18.87■□□□□ 0.61
SDF4-202ENST00000360001 KIR3DL3Q8N743 410 aa18.87■□□□□ 0.61
SDF4-202ENST00000360001 RNASE11Q8TAA1 199 aaKnown RBP18.87■□□□□ 0.61
SDF4-202ENST00000360001 RRNAD1Q96FB5 475 aaKnown RBP18.87■□□□□ 0.61
SDF4-202ENST00000360001 TNFSF18Q9UNG2 199 aa18.87■□□□□ 0.61
SDF4-202ENST00000360001 ABCA12Q86UK0 2595 aa18.87■□□□□ 0.61
SDF4-202ENST00000360001 A0A1B0GU03 582 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 TOR1AO14656 332 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 SCGB1D2O95969 90 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 KRASP01116 189 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 P0C879 139 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 EPHA1P21709 976 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 G6PCP35575 357 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 THOC7Q6I9Y2 204 aaKnown RBP18.86■□□□□ 0.61
SDF4-202ENST00000360001 FAM71F2Q6NXP2 309 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 FOXRED2Q8IWF2 684 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 TMEM186Q96B77 213 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 PLEKHA2Q9HB19 425 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 IGHV2-70DA0A0C4DH43 119 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 PET100P0DJ07 73 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 HLA-DRB5Q30154 266 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 C1orf122Q6ZSJ8 110 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 OR1S1Q8NH92 325 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 MRPL20Q9BYC9 149 aaKnown RBP18.86■□□□□ 0.61
SDF4-202ENST00000360001 MMP24Q9Y5R2 645 aa18.86■□□□□ 0.61
SDF4-202ENST00000360001 CSMD2Q7Z408 3487 aa18.85■□□□□ 0.61
SDF4-202ENST00000360001 K7EPK0 472 aa18.85■□□□□ 0.61
SDF4-202ENST00000360001 PITX3O75364 302 aa18.85■□□□□ 0.61
SDF4-202ENST00000360001 HPRT1P00492 218 aa18.85■□□□□ 0.61
SDF4-202ENST00000360001 COX7A1P24310 79 aa18.85■□□□□ 0.61
SDF4-202ENST00000360001 PRRX1P54821 245 aa18.85■□□□□ 0.61
SDF4-202ENST00000360001 DSCR9P59020 149 aa18.85■□□□□ 0.61
SDF4-202ENST00000360001 DIAPH2-AS1Q14236 149 aa18.85■□□□□ 0.61
SDF4-202ENST00000360001 FAM71E2Q8N5Q1 922 aa18.85■□□□□ 0.61
SDF4-202ENST00000360001 BEND2Q8NDZ0 799 aa18.85■□□□□ 0.61
SDF4-202ENST00000360001 SIRT7Q9NRC8 400 aa18.85■□□□□ 0.61
SDF4-202ENST00000360001 MMP26Q9NRE1 261 aa18.85■□□□□ 0.61
SDF4-202ENST00000360001 LSM5Q9Y4Y9 91 aaKnown RBP18.85■□□□□ 0.61
SDF4-202ENST00000360001 FAM157AC9JC47 383 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 DEDDO75618 318 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 ATG12O94817 140 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 PRTN3P24158 256 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 SMCO1Q147U7 214 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 HIST2H2BCQ6DN03 193 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 DCUN1D4Q92564 292 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 MFFQ9GZY8 342 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 CACNG5Q9UF02 275 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 L7N2F9 121 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 FOXH1O75593 365 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 REG1BP48304 166 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 CXorf66Q5JRM2 361 aaPredicted RBP18.84■□□□□ 0.61
SDF4-202ENST00000360001 PNKDQ8N490 385 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 OR4S2Q8NH73 311 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 KPTNQ9Y664 436 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms