RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 CFHR4Q92496 578 aa9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 ADTRPQ96IZ2 230 aa9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 ZNF48Q96MX3 618 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 HSD17B10Q99714 261 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 DPAGT1Q9H3H5 408 aa9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 C5orf66Q9H5L9 145 aa9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 FAM240BA0A1B0GVZ2 78 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 FAM90A9PA6NNJ1 464 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 LINC00473A8K010 186 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 TCRBP04435 133 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 PI3P19957 117 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 THBS3P49746 956 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 RPL30P62888 115 aaKnown RBP9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 SCGB2A2Q13296 93 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 PHLDA2Q53GA4 152 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 Q6YL49 198 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 MOB3BQ86TA1 216 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 ZNF383Q8NA42 475 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 OR5AN1Q8NGI8 311 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 DDB2Q92466 427 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 GPHA2Q96T91 129 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 SLC2A9Q9NRM0 540 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 COPZ2Q9P299 210 aa9.98□□□□□ -0.81
NIF3L1-201ENST00000359683 MDFIC2A0A1B0GVS7 189 aa9.97□□□□□ -0.81
NIF3L1-201ENST00000359683 TIMM23O14925 209 aa9.97□□□□□ -0.81
NIF3L1-201ENST00000359683 TNFSF12O43508 249 aa9.97□□□□□ -0.81
NIF3L1-201ENST00000359683 CD1BP29016 333 aa9.97□□□□□ -0.81
NIF3L1-201ENST00000359683 ARHGDIBP52566 201 aa9.97□□□□□ -0.81
NIF3L1-201ENST00000359683 PIGPP57054 158 aa9.97□□□□□ -0.81
NIF3L1-201ENST00000359683 ABCA11PQ4W5N1 156 aa9.97□□□□□ -0.81
NIF3L1-201ENST00000359683 GLDNQ6ZMI3 551 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-201ENST00000359683 NRARPQ7Z6K4 114 aa9.97□□□□□ -0.81
NIF3L1-201ENST00000359683 THNSL2Q86YJ6 484 aa9.97□□□□□ -0.81
NIF3L1-201ENST00000359683 PIFOQ8TCI5 191 aa9.97□□□□□ -0.81
NIF3L1-201ENST00000359683 C14orf166Q9Y224 244 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-201ENST00000359683 H0YJW9 148 aa9.96□□□□□ -0.81
NIF3L1-201ENST00000359683 MPPED1O15442 326 aa9.96□□□□□ -0.81
NIF3L1-201ENST00000359683 FAM157CP0CG43 387 aa9.96□□□□□ -0.81
NIF3L1-201ENST00000359683 S100GP29377 79 aa9.96□□□□□ -0.81
NIF3L1-201ENST00000359683 BRS3P32247 399 aa9.96□□□□□ -0.81
NIF3L1-201ENST00000359683 MC5RP33032 325 aa9.96□□□□□ -0.81
NIF3L1-201ENST00000359683 BRWD1-AS2P59051 145 aa9.96□□□□□ -0.81
NIF3L1-201ENST00000359683 EBI3Q14213 229 aa9.96□□□□□ -0.81
NIF3L1-201ENST00000359683 LRRC75BQ2VPJ9 315 aa9.96□□□□□ -0.81
NIF3L1-201ENST00000359683 ADAD2Q8NCV1 583 aaKnown RBP9.96□□□□□ -0.81
NIF3L1-201ENST00000359683 ZFAND2BQ8WV99 257 aa9.96□□□□□ -0.81
NIF3L1-201ENST00000359683 SSX3Q99909 188 aa9.96□□□□□ -0.81
NIF3L1-201ENST00000359683 FLVCR2Q9UPI3 526 aa9.96□□□□□ -0.81
NIF3L1-201ENST00000359683 IGHV3-72A0A0B4J1Y9 119 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 RNF212BA8MTL3 300 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 F2RP25116 425 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 IER3P46695 156 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 RAB13P51153 203 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 DHODHQ02127 395 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 CATR1Q13166 79 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 KCTD9Q7L273 389 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 TBC1D26Q86UD7 250 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 SIGLECL1Q8N7X8 197 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 CCDC71LQ8N9Z2 235 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 ENKURQ8TC29 256 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 TMEM230Q96A57 120 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 NUBP2Q9Y5Y2 271 aa9.96□□□□□ -0.82
NIF3L1-201ENST00000359683 CRYM-AS1A6NIL9 109 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 VENTXO95231 258 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 PTTG1O95997 202 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 RLN1P04808 185 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 RRASP10301 218 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 SLC25A42Q86VD7 318 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 CENPSQ8N2Z9 138 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 TCTEX1D1Q8N7M0 179 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 OR51H1Q8NH63 302 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 SPATA3Q8NHX4 192 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 TCTEX1D2Q8WW35 142 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 CAPSLQ8WWF8 208 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 ALX4Q9H161 411 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 C20orf85Q9H1P6 137 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 FAM212BQ9NTI7 297 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 SLC35D1Q9NTN3 355 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 PRELID3BQ9Y3B1 194 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 WASHC3Q9Y3C0 194 aa9.95□□□□□ -0.82
NIF3L1-201ENST00000359683 ATRQ13535 2644 aa9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 ARPC1BO15143 372 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 RBFOX2O43251 390 aaKnown RBP eCLIP9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 FCGR3BO75015 233 aa9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 APOA2P02652 100 aa9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 SNRNP70P08621 437 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 FAM106CPP0CH98 169 aa9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 CD24P25063 80 aa9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 KIR2DS2P43631 304 aa9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 MECP2P51608 486 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 TMEM128Q5BJH2 165 aa9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 TMED4Q7Z7H5 227 aa9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 PDPNQ86YL7 162 aa9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 CD300LFQ8TDQ1 290 aa9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 NAA60Q9H7X0 242 aa9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 NUDT15Q9NV35 164 aa9.94□□□□□ -0.82
NIF3L1-201ENST00000359683 TRAV6A0A075B6T7 132 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 TEX13DA0A0J9YY54 714 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 C3orf85A0A1B0GTC6 90 aa9.93□□□□□ -0.82
NIF3L1-201ENST00000359683 H3BUX3 64 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms