RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 hCG_38984A0A1B0GV85 526 aa12.63□□□□□ -0.39
UBAP1-202ENST00000359544 F6UZH7 168 aa12.63□□□□□ -0.39
UBAP1-202ENST00000359544 K7EP13 123 aa12.63□□□□□ -0.39
UBAP1-202ENST00000359544 VAMP5O95183 116 aa12.63□□□□□ -0.39
UBAP1-202ENST00000359544 SERPINA7P05543 415 aa12.63□□□□□ -0.39
UBAP1-202ENST00000359544 OR5G3P0C626 314 aa12.63□□□□□ -0.39
UBAP1-202ENST00000359544 LHX2P50458 406 aa12.63□□□□□ -0.39
UBAP1-202ENST00000359544 PRSS12P56730 875 aa12.63□□□□□ -0.39
UBAP1-202ENST00000359544 SUMO1P63165 101 aaKnown RBP12.63□□□□□ -0.39
UBAP1-202ENST00000359544 FFAR4Q5NUL3 377 aa12.63□□□□□ -0.39
UBAP1-202ENST00000359544 TMEM14EPQ6UXP3 125 aa12.63□□□□□ -0.39
UBAP1-202ENST00000359544 TCF23Q7RTU1 214 aa12.63□□□□□ -0.39
UBAP1-202ENST00000359544 GMPPAQ96IJ6 420 aaPredicted RBP12.63□□□□□ -0.39
UBAP1-202ENST00000359544 ZNF586Q9NXT0 402 aa12.63□□□□□ -0.39
UBAP1-202ENST00000359544 NPPCP23582 126 aa12.62□□□□□ -0.39
UBAP1-202ENST00000359544 COMPP49747 757 aaPredicted RBP12.62□□□□□ -0.39
UBAP1-202ENST00000359544 MMDQ15546 238 aa12.62□□□□□ -0.39
UBAP1-202ENST00000359544 OR8G2PQ6IF36 304 aa12.62□□□□□ -0.39
UBAP1-202ENST00000359544 SHISA6Q6ZSJ9 500 aa12.62□□□□□ -0.39
UBAP1-202ENST00000359544 BAGE3Q86Y29 109 aa12.62□□□□□ -0.39
UBAP1-202ENST00000359544 BAGE2Q86Y30 109 aa12.62□□□□□ -0.39
UBAP1-202ENST00000359544 NFAM1Q8NET5 270 aaPredicted RBP12.62□□□□□ -0.39
UBAP1-202ENST00000359544 IGHV1OR21-1A0A087WYE8 117 aa12.62□□□□□ -0.39
UBAP1-202ENST00000359544 KITLGP21583 273 aa12.62□□□□□ -0.39
UBAP1-202ENST00000359544 LINC00310P59036 64 aa12.62□□□□□ -0.39
UBAP1-202ENST00000359544 SSPNQ14714 243 aa12.62□□□□□ -0.39
UBAP1-202ENST00000359544 ZNF552Q9H707 407 aaPredicted RBP12.62□□□□□ -0.39
UBAP1-202ENST00000359544 KCNIP2Q9NS61 270 aa12.62□□□□□ -0.39
UBAP1-202ENST00000359544 EPG5Q9HCE0 2579 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 NTN3O00634 580 aaPredicted RBP12.61□□□□□ -0.39
UBAP1-202ENST00000359544 TNFSF11O14788 317 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 TRAPPC6AO75865 159 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 IGKV1-39P01597 117 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 IGKV1D-39P04432 117 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 FGF12P61328 243 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 Q0VG73 95 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 ZNF324BQ6AW86 544 aaPredicted RBP12.61□□□□□ -0.39
UBAP1-202ENST00000359544 SIGLECL1Q8N7X8 197 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 ZNF709Q8N972 641 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 OR1K1Q8NGR3 316 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 MSRB2Q9Y3D2 182 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 LOC400499M0QZD8 3231 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 CCL25O15444 150 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 NDUFB8O95169 186 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 IGKV1-5P01602 117 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 CTRLP40313 264 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 SPATA45Q537H7 98 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 ZNF468Q5VIY5 522 aaPredicted RBP12.61□□□□□ -0.39
UBAP1-202ENST00000359544 PCSK4Q6UW60 755 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 ANKRD37Q7Z713 158 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 C1orf174Q8IYL3 243 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 BATF2Q8N1L9 274 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 OR10G3Q8NGC4 313 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 MRPL18Q9H0U6 180 aaKnown RBP12.61□□□□□ -0.39
UBAP1-202ENST00000359544 LAMTOR2Q9Y2Q5 125 aa12.61□□□□□ -0.39
UBAP1-202ENST00000359544 DIRC3C9JPN6 131 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 CLDN1O95832 211 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 BCL3P20749 454 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 HNRNPA3P51991 378 aaKnown RBP12.6□□□□□ -0.39
UBAP1-202ENST00000359544 GNB1P62873 340 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 FAM69BQ5VUD6 431 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 ALKBH2Q6NS38 261 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 SAXO1Q8IYX7 474 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 STPG4Q8N801 248 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 OR2D3Q8NGH3 330 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 TXN2Q99757 166 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 LIN7CQ9NUP9 197 aaKnown RBP12.6□□□□□ -0.39
UBAP1-202ENST00000359544 COL27A1Q8IZC6 1860 aaPredicted RBP12.6□□□□□ -0.39
UBAP1-202ENST00000359544 DEGS1O15121 323 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 UBE2V1Q13404 147 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 KRTAP27-1Q3LI81 207 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 RIPPLY2Q5TAB7 128 aa12.6□□□□□ -0.39
UBAP1-202ENST00000359544 CPEB3Q8NE35 698 aaKnown RBP12.6□□□□□ -0.39
UBAP1-202ENST00000359544 ZNF703Q9H7S9 590 aaPredicted RBP12.6□□□□□ -0.39
UBAP1-202ENST00000359544 ERRFI1Q9UJM3 462 aaPredicted RBP12.6□□□□□ -0.39
UBAP1-202ENST00000359544 APC2O95996 2303 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 C17orf112F2Z3M2 114 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 TOMM40O96008 361 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 CDC34P49427 236 aaPredicted RBP12.59□□□□□ -0.39
UBAP1-202ENST00000359544 PMP22Q01453 160 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 MYPOPQ86VE0 399 aaPredicted RBP12.59□□□□□ -0.39
UBAP1-202ENST00000359544 FADS6Q8N9I5 356 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 TXNDC17Q9BRA2 123 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 IGHV5-10-1A0A0J9YXX1 117 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 NDUFB4O95168 129 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 KRTDAPP60985 99 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 ZNF90Q03938 601 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 Q6ZN92 141 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 KLHDC1Q8N7A1 406 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 OR10G8Q8NGN5 311 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 KCNE4Q8WWG9 221 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 CCDC74BQ96LY2 380 aa12.59□□□□□ -0.39
UBAP1-202ENST00000359544 GSX1Q9H4S2 264 aaPredicted RBP12.59□□□□□ -0.39
UBAP1-202ENST00000359544 ANKRD11Q6UB99 2663 aaPredicted RBP12.59□□□□□ -0.39
UBAP1-202ENST00000359544 TRBV6-6A0A0A6YYG2 114 aa12.58□□□□□ -0.4
UBAP1-202ENST00000359544 FAM166BA8MTA8 275 aa12.58□□□□□ -0.4
UBAP1-202ENST00000359544 CCL4P13236 92 aa12.58□□□□□ -0.4
UBAP1-202ENST00000359544 CBLN1P23435 193 aa12.58□□□□□ -0.4
UBAP1-202ENST00000359544 TMEM249Q2WGJ8 235 aa12.58□□□□□ -0.4
UBAP1-202ENST00000359544 ZDHHC23Q8IYP9 409 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms