RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 TMEM69Q5SWH9 247 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 MZT2AQ6P582 158 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 C1QL4Q86Z23 238 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 ZNF383Q8NA42 475 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 OR13F1Q8NGS4 319 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 ACOT12Q8WYK0 555 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 AP3S1Q92572 193 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 SLC25A46Q96AG3 418 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 RITA1Q96K30 269 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 MRPS26Q9BYN8 205 aaKnown RBP12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 AUNIPQ9H7T9 357 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 NECAP2Q9NVZ3 263 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 MRPS7Q9Y2R9 242 aaKnown RBP12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 WSB1Q9Y6I7 421 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 IGHV7-81A0A0B4J1V7 117 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 J3QRK9 145 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 CNIH1O95406 144 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 NFYAP23511 347 aaPredicted RBP12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 TGFBR1P36897 503 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 MYCNOSP40205 109 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 RORCP51449 518 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 VBP1P61758 197 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 CX3CL1P78423 397 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 PSG5Q15238 335 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 HOGA1Q86XE5 327 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 ZNF645Q8N7E2 425 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 DPF1Q92782 380 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 RCC1LQ96I51 464 aaKnown RBP12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 HARBI1Q96MB7 349 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 CLCC1Q96S66 551 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 MCRIP2Q9BUT9 160 aaKnown RBP12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 PKD1L1Q8TDX9 2849 aa12.39□□□□□ -0.43
TSPAN4-201ENST00000346501 IGKV1D-8A0A087WSZ0 117 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 SLC25A17O43808 307 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 SSX5O60225 188 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 PROP1O75360 226 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 IGKV1-16P04430 117 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 RPLP1P05386 114 aaKnown RBP12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 CDX1P47902 265 aaPredicted RBP12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 NCS1P62166 190 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 ECSCRQ19T08 205 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 VMA21Q3ZAQ7 101 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 ZNF562Q6V9R5 426 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 GPR141Q7Z602 305 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 BVESQ8NE79 360 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 WFDC9Q8NEX5 89 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 RBMXL1Q96E39 390 aaKnown RBP12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 CMTM3Q96MX0 182 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 DCUN1D5Q9BTE7 237 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 COMMD3Q9UBI1 195 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 A3GALT2U3KPV4 340 aa12.38□□□□□ -0.43
TSPAN4-201ENST00000346501 G3V4G9 280 aa12.37□□□□□ -0.43
TSPAN4-201ENST00000346501 CREBL2O60519 120 aaPredicted RBP12.37□□□□□ -0.43
TSPAN4-201ENST00000346501 TUSC2O75896 110 aa12.37□□□□□ -0.43
TSPAN4-201ENST00000346501 HLA-DQB1P01920 261 aa12.37□□□□□ -0.43
TSPAN4-201ENST00000346501 SAMD5Q5TGI4 173 aa12.37□□□□□ -0.43
TSPAN4-201ENST00000346501 PYHIN1Q6K0P9 492 aa12.37□□□□□ -0.43
TSPAN4-201ENST00000346501 C8orf86Q6ZUL3 223 aa12.37□□□□□ -0.43
TSPAN4-201ENST00000346501 KCTD9Q7L273 389 aa12.37□□□□□ -0.43
TSPAN4-201ENST00000346501 PPP1R27Q86WC6 154 aa12.37□□□□□ -0.43
TSPAN4-201ENST00000346501 ANKRD13BQ86YJ7 626 aa12.37□□□□□ -0.43
TSPAN4-201ENST00000346501 BORCS5Q969J3 196 aa12.37□□□□□ -0.43
TSPAN4-201ENST00000346501 HSD17B10Q99714 261 aaKnown RBP12.37□□□□□ -0.43
TSPAN4-201ENST00000346501 FOXA2Q9Y261 457 aaPredicted RBP12.37□□□□□ -0.43
TSPAN4-201ENST00000346501 A0A1W2PN81 502 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 PLXNB1O43157 2135 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 ACTL6BO94805 426 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 CA2P00918 260 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 APOA1P02647 267 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 PSMB8P28062 276 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 DUTP33316 252 aaKnown RBP12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 PRSS3P35030 304 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 CHRNA7P36544 502 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 RAB25P57735 213 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 TMEM177Q53S58 311 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 OXLD1Q5BKU9 147 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 GPR107Q5VW38 600 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 UNQ5815/PRO19632Q6UWF5 114 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 REC114Q7Z4M0 266 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 RNF152Q8N8N0 203 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 OR5AP2Q8NGF4 316 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 OSR1Q8TAX0 266 aaPredicted RBP12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 ARPC1AQ92747 370 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 ZMAT5Q9UDW3 170 aaKnown RBP12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 VSIG4Q9Y279 399 aa12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 RBMX2Q9Y388 322 aaKnown RBP12.36□□□□□ -0.43
TSPAN4-201ENST00000346501 FAM25AB3EWG3 89 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 FAM25CB3EWG5 89 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 FAM25GB3EWG6 89 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 G3V318 75 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 CCL24O00175 119 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 CRYZL1O95825 349 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 FCGR2CP31995 323 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 CRIP2P52943 208 aaPredicted RBP12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 LINC00205P59089 165 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 TAS2R20P59543 309 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 HERV-K104P61576 105 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 GNB1P62873 340 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 CFHR3Q02985 330 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 FXYD3Q14802 87 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms