RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 SCTP09683 121 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 SLC25A6P12236 298 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 FXYD4P59646 89 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 PHLDA2Q53GA4 152 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 GAPTQ8N292 157 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 BSCL2Q96G97 398 aaPredicted RBP10.74□□□□□ -0.69
CLK3-201ENST00000345005 SH3BGRL3Q9H299 93 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 IL19Q9UHD0 177 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 DYSFO75923 2080 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 SRRM5B3KS81 715 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 HSD17B6O14756 317 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 PPP1R2P9O14990 202 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 SCAF4O95104 1147 aaKnown RBP10.74□□□□□ -0.69
CLK3-201ENST00000345005 PPP1CCP36873 323 aaKnown RBP10.74□□□□□ -0.69
CLK3-201ENST00000345005 GATA4P43694 442 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 FHITP49789 147 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 ZNF674Q2M3X9 581 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 SP5Q6BEB4 398 aaPredicted RBP10.74□□□□□ -0.69
CLK3-201ENST00000345005 C20orf204Q6ZNR8 217 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 SLC35G3Q8N808 338 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 ITLN1Q8WWA0 313 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 RAB39BQ96DA2 213 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 NOL4LQ96MY1 436 aaPredicted RBP10.74□□□□□ -0.69
CLK3-201ENST00000345005 WSB1Q9Y6I7 421 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 DIDO1Q9BTC0 2240 aaKnown RBP10.74□□□□□ -0.69
CLK3-201ENST00000345005 COL6A6A6NMZ7 2263 aa10.74□□□□□ -0.69
CLK3-201ENST00000345005 KALRNO60229 2985 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 FAM90A27PA6NNH2 459 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 PPYP01298 95 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 IFNA5P01569 189 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 OR4A8P0C604 315 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 VDAC1P21796 283 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 AADACP22760 399 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 DDTP30046 118 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 NDUFA6P56556 154 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 HLA-DRB3P79483 266 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 DLK1P80370 383 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 TNFAIP6P98066 277 aaPredicted RBP10.73□□□□□ -0.69
CLK3-201ENST00000345005 ELOBQ15370 118 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 ADIPOQQ15848 244 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 PYY3Q5JQD4 70 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 C9orf152Q5JTZ5 239 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 NCMAPQ5T1S8 102 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 SPSB3Q6PJ21 355 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 H1FOOQ8IZA3 346 aaPredicted RBP10.73□□□□□ -0.69
CLK3-201ENST00000345005 TMEM252Q8N6L7 170 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 OR5R1Q8NH85 324 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 PLPPR1Q8TBJ4 325 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 DIRC2Q96SL1 478 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 CTDSP1Q9GZU7 261 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 PRDM13Q9H4Q3 707 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 DOK5Q9P104 306 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 TRAPPC2LQ9UL33 140 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 CACNA1DQ01668 2161 aa10.73□□□□□ -0.69
CLK3-201ENST00000345005 A0A1B0GV90 55 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 C1QL1O75973 258 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 ZNF205O95201 554 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 IGHV1-46P01743 117 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 RNF224P0DH78 156 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 ADORA2A-AS1P86434 159 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 ID3Q02535 119 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 SLC35E4Q6ICL7 350 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 MOGAT3Q86VF5 341 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 CMTM1Q8IZ96 169 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 ZNF383Q8NA42 475 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 P2RX4Q99571 388 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 ATP5SQ99766 215 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 ERRFI1Q9UJM3 462 aaPredicted RBP10.72□□□□□ -0.69
CLK3-201ENST00000345005 WIPI2Q9Y4P8 454 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 TMEM30CPA0ZSE6 113 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 NKX2-6A6NCS4 301 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 FAM24AA6NFZ4 105 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 ATXN7O15265 892 aaPredicted RBP10.72□□□□□ -0.69
CLK3-201ENST00000345005 PSPNO60542 156 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 LHBP01229 141 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 PRDX2P32119 198 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 CEBPDP49716 269 aaPredicted RBP10.72□□□□□ -0.69
CLK3-201ENST00000345005 TAS2R30P59541 319 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 RPL23AP62750 156 aaKnown RBP10.72□□□□□ -0.69
CLK3-201ENST00000345005 HERPUD1Q15011 391 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 SELENOHQ8IZQ5 122 aaKnown RBP10.72□□□□□ -0.69
CLK3-201ENST00000345005 C1orf87Q8N0U7 546 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 OR10J5Q8NHC4 309 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 RARRES2Q99969 163 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 MBNL3Q9NUK0 354 aaKnown RBP10.72□□□□□ -0.69
CLK3-201ENST00000345005 HCFC1P51610 2035 aa10.72□□□□□ -0.69
CLK3-201ENST00000345005 NBASA2RRP1 2371 aa10.71□□□□□ -0.69
CLK3-201ENST00000345005 IGKV1-6A0A0C4DH72 117 aa10.71□□□□□ -0.69
CLK3-201ENST00000345005 CLDN34H7C241 214 aa10.71□□□□□ -0.69
CLK3-201ENST00000345005 TUSC2O75896 110 aa10.71□□□□□ -0.69
CLK3-201ENST00000345005 CD3EP07766 207 aa10.71□□□□□ -0.69
CLK3-201ENST00000345005 ADH4P08319 380 aa10.71□□□□□ -0.69
CLK3-201ENST00000345005 UCP1P25874 307 aa10.71□□□□□ -0.69
CLK3-201ENST00000345005 COL10A1Q03692 680 aa10.71□□□□□ -0.69
CLK3-201ENST00000345005 PMS2P11Q13670 270 aa10.71□□□□□ -0.69
CLK3-201ENST00000345005 ICAM4Q14773 271 aa10.71□□□□□ -0.69
CLK3-201ENST00000345005 CLEC9AQ6UXN8 241 aa10.71□□□□□ -0.69
CLK3-201ENST00000345005 MEX3BQ6ZN04 569 aaKnown RBP10.71□□□□□ -0.69
CLK3-201ENST00000345005 OR5D13Q8NGL4 314 aa10.71□□□□□ -0.69
CLK3-201ENST00000345005 OR5C1Q8NGR4 320 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms