RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 C14orf144Q96I85 54 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 TMEM242Q9NWH2 141 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 URB1O60287 2271 aaKnown RBP15.53■□□□□ 0.08
SMC4-201ENST00000344722 TMEM229AB2RXF0 380 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 F5H697 171 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 NDUFS6O75380 124 aaKnown RBP15.53■□□□□ 0.08
SMC4-201ENST00000344722 CCL3P10147 92 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 LINC00114Q6XXX2 140 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 SPEM1Q8N4L4 309 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 GLRX2Q9NS18 164 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 PAPPA2Q9BXP8 1791 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 SELENOTP62341 195 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 OR8B2Q96RD0 313 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 C19orf24Q9BVV8 132 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 FOXD3Q9UJU5 478 aaPredicted RBP15.53■□□□□ 0.08
SMC4-201ENST00000344722 RBBP6Q7Z6E9 1792 aaKnown RBP15.53■□□□□ 0.08
SMC4-201ENST00000344722 RPL23P62829 140 aaKnown RBP15.53■□□□□ 0.08
SMC4-201ENST00000344722 SNAI3Q3KNW1 292 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 C2orf88Q9BSF0 95 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 HIGD1AQ9Y241 93 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 LOC101059948A0A1B0GTJ6 334 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 PRRG2O14669 202 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 HYPMO75409 117 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 ZNF83P51522 516 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 SFXN3Q9BWM7 321 aa15.53■□□□□ 0.08
SMC4-201ENST00000344722 OR2H2O95918 312 aa15.52■□□□□ 0.08
SMC4-201ENST00000344722 BEND2Q8NDZ0 799 aa15.52■□□□□ 0.08
SMC4-201ENST00000344722 CKAP5Q14008 2032 aa15.52■□□□□ 0.08
SMC4-201ENST00000344722 LIPFP07098 398 aa15.52■□□□□ 0.08
SMC4-201ENST00000344722 GCHFRP30047 84 aa15.52■□□□□ 0.08
SMC4-201ENST00000344722 TMEM106BQ9NUM4 274 aa15.52■□□□□ 0.08
SMC4-201ENST00000344722 KIR2DL1P43626 348 aaPredicted RBP15.52■□□□□ 0.07
SMC4-201ENST00000344722 KIR2DL2P43627 348 aaPredicted RBP15.52■□□□□ 0.07
SMC4-201ENST00000344722 GFI1Q99684 422 aa15.52■□□□□ 0.07
SMC4-201ENST00000344722 ARID2Q68CP9 1835 aa15.52■□□□□ 0.07
SMC4-201ENST00000344722 ZNF236Q9UL36 1845 aa15.52■□□□□ 0.07
SMC4-201ENST00000344722 K7N7A8 449 aa15.52■□□□□ 0.07
SMC4-201ENST00000344722 NUBP1P53384 320 aa15.52■□□□□ 0.07
SMC4-201ENST00000344722 RPP25Q9BUL9 199 aaKnown RBP15.52■□□□□ 0.07
SMC4-201ENST00000344722 C8orf88P0DMB2 117 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 PGLYRP4Q96LB8 373 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 CYTL1Q9NRR1 136 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 SMIM13P0DJ93 91 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 ARF6P62330 175 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 PKIBQ9C010 78 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 FBLN5Q9UBX5 448 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 A0A1B0GW64 132 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 UCP1P25874 307 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 DLX1P56177 255 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 CENPWQ5EE01 88 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 NPCDR1Q9BY65 106 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 PLSCR2Q9NRY7 297 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 DLL3Q9NYJ7 618 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 GPX4P36969 197 aaPredicted RBP15.51■□□□□ 0.07
SMC4-201ENST00000344722 IGLV3-21P80748 117 aaPredicted RBP15.51■□□□□ 0.07
SMC4-201ENST00000344722 SLC25A40Q8TBP6 338 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 C18orf12Q96KH6 178 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 IMMP2LQ96T52 175 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 ZNF576Q9H609 170 aa15.51■□□□□ 0.07
SMC4-201ENST00000344722 CEACAM18A8MTB9 384 aa15.5■□□□□ 0.07
SMC4-201ENST00000344722 B4E171 279 aa15.5■□□□□ 0.07
SMC4-201ENST00000344722 IGHV1OR15-9A0A0B4J2B8 117 aa15.5■□□□□ 0.07
SMC4-201ENST00000344722 A1L4Q6 167 aa15.5■□□□□ 0.07
SMC4-201ENST00000344722 TMEM189A5PLL7 270 aa15.5■□□□□ 0.07
SMC4-201ENST00000344722 EGR1P18146 543 aa15.5■□□□□ 0.07
SMC4-201ENST00000344722 KCNMB1Q16558 191 aa15.5■□□□□ 0.07
SMC4-201ENST00000344722 GRAMD2BQ96HH9 432 aa15.5■□□□□ 0.07
SMC4-201ENST00000344722 GDF15Q99988 308 aa15.5■□□□□ 0.07
SMC4-201ENST00000344722 TRBV24-1A0A075B6N3 115 aa15.5■□□□□ 0.07
SMC4-201ENST00000344722 TRBV6-7A0A0A0MS04 114 aa15.5■□□□□ 0.07
SMC4-201ENST00000344722 ZNF716A6NP11 495 aa15.5■□□□□ 0.07
SMC4-201ENST00000344722 SDK1Q7Z5N4 2213 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 GNG7O60262 68 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 LINC00614P0C842 121 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 NPBWR2P48146 333 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 COL11A1P12107 1806 aaPredicted RBP15.49■□□□□ 0.07
SMC4-201ENST00000344722 GREB1LQ9C091 1923 aaPredicted RBP15.49■□□□□ 0.07
SMC4-201ENST00000344722 A0A0J9YW62 118 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 C2CD4DB7Z1M9 353 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 TWIST1Q15672 202 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 IZUMO4Q1ZYL8 232 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 NUDT3O95989 172 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 TMEM177Q53S58 311 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 SCN3AQ9NY46 2000 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 TMSB15BA0A087X1C1 80 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 MARCH11A6NNE9 402 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 DLEU1O43261 78 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 SERF1AO75920 110 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 HOXA4Q00056 320 aaPredicted RBP15.49■□□□□ 0.07
SMC4-201ENST00000344722 PRDM13Q9H4Q3 707 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 HBBP68871 147 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 PYY3Q5JQD4 70 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 MUC15Q8N387 334 aa15.49■□□□□ 0.07
SMC4-201ENST00000344722 PGPA6NDG6 321 aa15.48■□□□□ 0.07
SMC4-201ENST00000344722 DLL1O00548 723 aa15.48■□□□□ 0.07
SMC4-201ENST00000344722 CXCL1P09341 107 aa15.48■□□□□ 0.07
SMC4-201ENST00000344722 OR4A8P0C604 315 aa15.48■□□□□ 0.07
SMC4-201ENST00000344722 CKS2P33552 79 aa15.48■□□□□ 0.07
SMC4-201ENST00000344722 FBLN7Q53RD9 439 aa15.48■□□□□ 0.07
SMC4-201ENST00000344722 HIST1H4GQ99525 98 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms