RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 UNC119Q13432 240 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 FAM57AQ8TBR7 257 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 TUBA4BQ9H853 241 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 GP6Q9HCN6 339 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 RCC1P18754 421 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-202ENST00000342494 LTBRP36941 435 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 DPPA3Q6W0C5 159 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 OR1N2Q8NGR9 330 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 RBKSQ9H477 322 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 TNS1Q9HBL0 1735 aaKnown RBP12.86□□□□□ -0.35
UBE3B-202ENST00000342494 IGKV3D-11A0A0A0MRZ8 115 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 FAM74A7A6NL05 159 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 IGKV3-11P04433 115 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 HSPE1P61604 102 aaKnown RBP12.86□□□□□ -0.35
UBE3B-202ENST00000342494 LCN2P80188 198 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 IGLV3-21P80748 117 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-202ENST00000342494 RELQ04864 619 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-202ENST00000342494 CTHRC1Q96CG8 243 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 SIPA1L3O60292 1781 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-202ENST00000342494 TRBV5-5A0A0J9YX44 114 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 CELA3AP09093 270 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 TSPOP30536 169 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 PRSS53Q2L4Q9 553 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 FAM53AQ6NSI3 398 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-202ENST00000342494 FGFRL1Q8N441 504 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 LSM10Q969L4 123 aaKnown RBP12.86□□□□□ -0.35
UBE3B-202ENST00000342494 ST6GAL2Q96JF0 529 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 TMEM106BQ9NUM4 274 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 IL36RNQ9UBH0 155 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 KCNE5Q9UJ90 142 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 NINQ8N4C6 2090 aa12.86□□□□□ -0.35
UBE3B-202ENST00000342494 LOC389332A0A1B0GUA5 103 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 A8MWL6 223 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 LMX1BO60663 402 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 ZNF324O75467 553 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-202ENST00000342494 PGLYRP1O75594 196 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-202ENST00000342494 NPPCP23582 126 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 ANGPTL6Q8NI99 470 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 NEU4Q8WWR8 484 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-202ENST00000342494 PACRGQ96M98 296 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-202ENST00000342494 PGPA6NDG6 321 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 J3QW42 95 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 YAE1D1Q9NRH1 226 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 FAM206AQ9NX38 181 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 REG1AP05451 166 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 RUNX1Q01196 453 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 CHRNA10Q9GZZ6 450 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 MMP9P14780 707 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 MUC1P15941 1255 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-202ENST00000342494 HOXA6P31267 233 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 SNRPD3P62318 126 aaKnown RBP12.85□□□□□ -0.35
UBE3B-202ENST00000342494 CEBPEQ15744 281 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 DSPPQ9NZW4 1301 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 TNFSF18Q9UNG2 199 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 FUT9Q9Y231 359 aa12.85□□□□□ -0.35
UBE3B-202ENST00000342494 H3BQ15 152 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 MFAP2P55001 183 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 UNQ9370/PRO34162Q6UXP9 181 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 HSD17B13Q7Z5P4 300 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-202ENST00000342494 WDFY1Q8IWB7 410 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 ISOC2Q96AB3 205 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 LINC00470Q9BZP3 86 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 PHLDA3Q9Y5J5 127 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 M0R143 59 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 SSBP3Q9BWW4 388 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-202ENST00000342494 CIDEAO60543 219 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 CFDP00746 253 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-202ENST00000342494 TGFAP01135 160 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 IGF2P01344 180 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 CSRP1P21291 193 aaKnown RBP12.84□□□□□ -0.35
UBE3B-202ENST00000342494 PSG9Q00887 426 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 H1FOOQ8IZA3 346 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-202ENST00000342494 ZNF418Q8TF45 676 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-202ENST00000342494 ZDBF2Q9HCK1 2354 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 TMEM218A2RU14 115 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 TMEM252Q8N6L7 170 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 TMEM54Q969K7 222 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 MEGF10Q96KG7 1140 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 SCN4AP35499 1836 aa12.84□□□□□ -0.35
UBE3B-202ENST00000342494 CBY3A6NI87 242 aa12.83□□□□□ -0.35
UBE3B-202ENST00000342494 MARCH11A6NNE9 402 aa12.83□□□□□ -0.35
UBE3B-202ENST00000342494 BSPH1Q075Z2 132 aa12.83□□□□□ -0.35
UBE3B-202ENST00000342494 COL24A1Q17RW2 1714 aa12.83□□□□□ -0.35
UBE3B-202ENST00000342494 OR11H7Q8NGC8 314 aa12.83□□□□□ -0.35
UBE3B-202ENST00000342494 ZNF502Q8TBZ5 544 aa12.83□□□□□ -0.35
UBE3B-202ENST00000342494 GPX1P07203 203 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 TNFSF10P50591 281 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 ELOVL1Q9BW60 279 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 ALX4Q9H161 411 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-202ENST00000342494 CHCHD2Q9Y6H1 151 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-202ENST00000342494 TRGV3P03979 118 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 SUCLG1P53597 346 aaKnown RBP12.83□□□□□ -0.36
UBE3B-202ENST00000342494 ZNRF1Q8ND25 227 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 RSG1Q9BU20 258 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 A0A0B4J293 547 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 APCDD1LQ8NCL9 501 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 TMEM45BQ96B21 275 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 MOB4Q9Y3A3 225 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 PLA2G10O15496 165 aa12.83□□□□□ -0.36
UBE3B-202ENST00000342494 CECR9P0C854 216 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms