RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 SELENOVP59797 346 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 HBG1P69891 147 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 HBG2P69892 147 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 MZT1Q08AG7 82 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 MSMO1Q15800 293 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 LILRB2Q8N423 598 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 OR2Z1Q8NG97 314 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 RFESDQ8TAC1 157 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 TCTEX1D2Q8WW35 142 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 RBMXL1Q96E39 390 aaKnown RBP12.49□□□□□ -0.41
TPM3-208ENST00000341485 WFIKKN1Q96NZ8 548 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 RPRMQ9NS64 109 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 HSPB7Q9UBY9 170 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 CACNA1DQ01668 2161 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 CACNA1AO00555 2505 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 TLN1Q9Y490 2541 aaKnown RBP12.49□□□□□ -0.41
TPM3-208ENST00000341485 C15orf65H3BRN8 121 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 IGHV3-13P01766 116 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 MT-ND4LP03901 98 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 ARG1P05089 322 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 OR8U8P0C7N1 319 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 ADORA2A-AS1P86434 159 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 CATR1Q13166 79 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 TMEM14EPQ6UXP3 125 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 OR4C12Q96R67 309 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 PSMG3Q9BT73 122 aaPredicted RBP12.49□□□□□ -0.41
TPM3-208ENST00000341485 USF3Q68DE3 2245 aa12.48□□□□□ -0.41
TPM3-208ENST00000341485 ODAMA1E959 279 aa12.48□□□□□ -0.41
TPM3-208ENST00000341485 DPRXA6NFQ7 191 aa12.48□□□□□ -0.41
TPM3-208ENST00000341485 ATXN7O15265 892 aaPredicted RBP12.48□□□□□ -0.41
TPM3-208ENST00000341485 CLDN1O95832 211 aa12.48□□□□□ -0.41
TPM3-208ENST00000341485 HSPB1P04792 205 aaKnown RBP12.48□□□□□ -0.41
TPM3-208ENST00000341485 PRDX2P32119 198 aa12.48□□□□□ -0.41
TPM3-208ENST00000341485 RAB2AP61019 212 aa12.48□□□□□ -0.41
TPM3-208ENST00000341485 BSPH1Q075Z2 132 aa12.48□□□□□ -0.41
TPM3-208ENST00000341485 ZNF726P1Q15940 193 aa12.48□□□□□ -0.41
TPM3-208ENST00000341485 RNF212Q495C1 297 aa12.48□□□□□ -0.41
TPM3-208ENST00000341485 NUP37Q8NFH4 326 aa12.48□□□□□ -0.41
TPM3-208ENST00000341485 WDR61Q9GZS3 305 aaKnown RBP12.48□□□□□ -0.41
TPM3-208ENST00000341485 RP1L1Q8IWN7 2480 aaPredicted RBP12.48□□□□□ -0.41
TPM3-208ENST00000341485 LOC102723971A0A1B0GUV8 181 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 DEFB108AA8MXU0 73 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 H3BQ15 152 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 ST8SIA5O15466 376 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 ZNF737O75373 536 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 RPL35P42766 123 aaKnown RBP12.47□□□□□ -0.41
TPM3-208ENST00000341485 HOXA1P49639 335 aaPredicted RBP12.47□□□□□ -0.41
TPM3-208ENST00000341485 CEBPGP53567 150 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 LINC00205P59089 165 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 RAB5BP61020 215 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 SLC38A11Q08AI6 406 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 EDDM3AQ14507 147 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 SSX7Q7RTT5 188 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 CYB561D1Q8N8Q1 229 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 CA5BP1Q8WTZ4 195 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 RNASE6Q93091 150 aaKnown RBP12.47□□□□□ -0.41
TPM3-208ENST00000341485 PARD6GQ9BYG4 376 aaPredicted RBP12.47□□□□□ -0.41
TPM3-208ENST00000341485 UNKLQ9H9P5 680 aaKnown RBP12.47□□□□□ -0.41
TPM3-208ENST00000341485 IGKV1D-17A0A075B6S4 117 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 LRRC30A6NM36 301 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 LINC00473A8K010 186 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 C1orf196B1AJZ1 125 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 SRRM5B3KS81 715 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 AKR1D1P51857 326 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 PAX5Q02548 391 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 Q3ZCU0 254 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 SPRNQ5BIV9 151 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 MRPL37Q9BZE1 423 aaKnown RBP12.47□□□□□ -0.41
TPM3-208ENST00000341485 PSG11Q9UQ72 335 aa12.47□□□□□ -0.41
TPM3-208ENST00000341485 hCG_1809904A0A1W2PP81 198 aa12.46□□□□□ -0.41
TPM3-208ENST00000341485 A0A1W2PR64 198 aa12.46□□□□□ -0.41
TPM3-208ENST00000341485 A0A1W2PRV1 198 aa12.46□□□□□ -0.41
TPM3-208ENST00000341485 FBXL19-AS1Q494R0 122 aa12.46□□□□□ -0.41
TPM3-208ENST00000341485 KHDC3LQ587J8 217 aa12.46□□□□□ -0.41
TPM3-208ENST00000341485 OR8G2PQ6IF36 304 aa12.46□□□□□ -0.41
TPM3-208ENST00000341485 ZNF66Q6ZN08 573 aa12.46□□□□□ -0.41
TPM3-208ENST00000341485 FAM24BQ8N5W8 94 aa12.46□□□□□ -0.41
TPM3-208ENST00000341485 MBD3L1Q8WWY6 194 aa12.46□□□□□ -0.41
TPM3-208ENST00000341485 AGMATQ9BSE5 352 aa12.46□□□□□ -0.41
TPM3-208ENST00000341485 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.46□□□□□ -0.41
TPM3-208ENST00000341485 CLN8Q9UBY8 286 aa12.46□□□□□ -0.41
TPM3-208ENST00000341485 CHD8Q9HCK8 2581 aa12.46□□□□□ -0.41
TPM3-208ENST00000341485 IGLV3-9A0A075B6K5 115 aa12.46□□□□□ -0.42
TPM3-208ENST00000341485 UBE2L5PA0A1B0GUS4 154 aa12.46□□□□□ -0.42
TPM3-208ENST00000341485 RAB29O14966 203 aa12.46□□□□□ -0.42
TPM3-208ENST00000341485 SPINT2O43291 252 aa12.46□□□□□ -0.42
TPM3-208ENST00000341485 CLDN14O95500 239 aa12.46□□□□□ -0.42
TPM3-208ENST00000341485 HTD2P86397 168 aa12.46□□□□□ -0.42
TPM3-208ENST00000341485 LTC4SQ16873 150 aa12.46□□□□□ -0.42
TPM3-208ENST00000341485 ZNF787Q6DD87 383 aa12.46□□□□□ -0.42
TPM3-208ENST00000341485 TRAT1Q6PIZ9 186 aa12.46□□□□□ -0.42
TPM3-208ENST00000341485 LCN15Q6UWW0 184 aa12.46□□□□□ -0.42
TPM3-208ENST00000341485 TAF15Q92804 592 aaKnown RBP eCLIP12.46□□□□□ -0.42
TPM3-208ENST00000341485 RAB39BQ96DA2 213 aa12.46□□□□□ -0.42
TPM3-208ENST00000341485 RCC1LQ96I51 464 aaKnown RBP12.46□□□□□ -0.42
TPM3-208ENST00000341485 YPEL4Q96NS1 127 aa12.46□□□□□ -0.42
TPM3-208ENST00000341485 GNG13Q9P2W3 67 aa12.46□□□□□ -0.42
TPM3-208ENST00000341485 IGHV3OR15-7A0A075B7D8 119 aa12.45□□□□□ -0.42
TPM3-208ENST00000341485 SPRY3O43610 288 aa12.45□□□□□ -0.42
TPM3-208ENST00000341485 CD55P08174 381 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms