RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 KCNK15Q9H427 330 aa10.04□□□□□ -0.8
NECTIN1-203ENST00000341398 SLC35D1Q9NTN3 355 aa10.04□□□□□ -0.8
NECTIN1-203ENST00000341398 HUWE1Q7Z6Z7 4374 aaKnown RBP10.04□□□□□ -0.8
NECTIN1-203ENST00000341398 A0A0A6YYD4 124 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 TRDCB7Z8K6 153 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 SLC25A17O43808 307 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 IGLV1-51P01701 117 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 IGKV1-16P04430 117 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 AADACP22760 399 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 PSMA1P25786 263 aaKnown RBP10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 RAB11BQ15907 218 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 OGFRL1Q5TC84 451 aaPredicted RBP10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 LIPKQ5VXJ0 399 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 ZNF383Q8NA42 475 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 OR5T1Q8NG75 326 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 TMEM203Q969S6 136 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 CITED4Q96RK1 184 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 HDHD3Q9BSH5 251 aaPredicted RBP10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 CENPOQ9BU64 300 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 KRTAP17-1Q9BYP8 105 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 RDH8Q9NYR8 311 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 TPRKBQ9Y3C4 175 aa10.03□□□□□ -0.8
NECTIN1-203ENST00000341398 A8MZ25 164 aa10.02□□□□□ -0.8
NECTIN1-203ENST00000341398 M0R1X1 148 aa10.02□□□□□ -0.8
NECTIN1-203ENST00000341398 CASQ2O14958 399 aaPredicted RBP10.02□□□□□ -0.8
NECTIN1-203ENST00000341398 CD3GP09693 182 aa10.02□□□□□ -0.8
NECTIN1-203ENST00000341398 IGHV4-30-4P0DP06 118 aa10.02□□□□□ -0.8
NECTIN1-203ENST00000341398 OR4A4PQ8NGN8 299 aa10.02□□□□□ -0.8
NECTIN1-203ENST00000341398 OR10J5Q8NHC4 309 aa10.02□□□□□ -0.8
NECTIN1-203ENST00000341398 ARHGAP5-AS1Q96IT6 56 aa10.02□□□□□ -0.8
NECTIN1-203ENST00000341398 TM2D3Q9BRN9 247 aa10.02□□□□□ -0.8
NECTIN1-203ENST00000341398 PECRQ9BY49 303 aa10.02□□□□□ -0.8
NECTIN1-203ENST00000341398 AK6Q9Y3D8 172 aaKnown RBP10.02□□□□□ -0.8
NECTIN1-203ENST00000341398 RBM7Q9Y580 266 aaKnown RBP10.02□□□□□ -0.8
NECTIN1-203ENST00000341398 DNAH7Q8WXX0 4024 aa10.02□□□□□ -0.81
NECTIN1-203ENST00000341398 ANKRD34BA5PLL1 514 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 SHOXO15266 292 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 DENRO43583 198 aaKnown RBP10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 PROP1O75360 226 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 HSMCR30P0CW71 290 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 RRASP10301 218 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 TMEM50BP56557 158 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 TPBGQ13641 420 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 RTL8BQ17RB0 113 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 C2orf76Q3KRA6 126 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 FAM3DQ96BQ1 224 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 ISOC1Q96CN7 298 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 USMG5Q96IX5 58 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 PEF1Q9UBV8 284 aaKnown RBP10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 RAB22AQ9UL26 194 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 LSM2Q9Y333 95 aaKnown RBP10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 TNCP24821 2201 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 BET1O15155 118 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 BRI3O95415 125 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 IFNA6P05013 189 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 GADD45AP24522 165 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 KLF5Q13887 457 aaPredicted RBP10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 GTSCR1Q86UQ5 136 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 Q8N1Y9 231 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 OR9G4Q8NGQ1 327 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 HARBI1Q96MB7 349 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 PHB2Q99623 299 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 TINAGL1Q9GZM7 467 aaPredicted RBP10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 TUBA4BQ9H853 241 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 C19orf73Q9NVV2 129 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 COA4Q9NYJ1 87 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 V9GY05 133 aa10.01□□□□□ -0.81
NECTIN1-203ENST00000341398 RYR2Q92736 4967 aa10□□□□□ -0.81
NECTIN1-203ENST00000341398 FOXI3A8MTJ6 420 aaPredicted RBP10□□□□□ -0.81
NECTIN1-203ENST00000341398 FABP7O15540 132 aa10□□□□□ -0.81
NECTIN1-203ENST00000341398 DIRAS3O95661 229 aa10□□□□□ -0.81
NECTIN1-203ENST00000341398 CALRP27797 417 aaKnown RBP10□□□□□ -0.81
NECTIN1-203ENST00000341398 LINC00205P59089 165 aa10□□□□□ -0.81
NECTIN1-203ENST00000341398 RPEL1Q2QD12 228 aa10□□□□□ -0.81
NECTIN1-203ENST00000341398 LCN12Q6JVE5 192 aa10□□□□□ -0.81
NECTIN1-203ENST00000341398 TMEM91Q6ZNR0 172 aa10□□□□□ -0.81
NECTIN1-203ENST00000341398 SNAPC3Q92966 411 aa10□□□□□ -0.81
NECTIN1-203ENST00000341398 RAB3CQ96E17 227 aa10□□□□□ -0.81
NECTIN1-203ENST00000341398 ADTRPQ96IZ2 230 aa10□□□□□ -0.81
NECTIN1-203ENST00000341398 OR2D2Q9H210 308 aa10□□□□□ -0.81
NECTIN1-203ENST00000341398 ACOT13Q9NPJ3 140 aa10□□□□□ -0.81
NECTIN1-203ENST00000341398 A0A0B4J203 849 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 IGKV1-6A0A0C4DH72 117 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 PDCD5O14737 125 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 RGS10O43665 173 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 CLDN12P56749 244 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 SYNJ2BPP57105 145 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 PJVKQ0ZLH3 352 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 MLLT11Q13015 90 aaPredicted RBP9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 IRF3Q14653 427 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 VMA21Q3ZAQ7 101 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 TMEM177Q53S58 311 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 ZNF343Q6P1L6 599 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 HAPLN4Q86UW8 402 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 Q8N402 240 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 TEX45Q8NA69 505 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 BVESQ8NE79 360 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 GFI1Q99684 422 aa9.99□□□□□ -0.81
NECTIN1-203ENST00000341398 GINS4Q9BRT9 223 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms