RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 TRAF3IP2O43734 574 aaPredicted RBP10.06□□□□□ -0.8
RTN3-203ENST00000341307 CTLA4P16410 223 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 SPINK2P20155 84 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 MSR1P21757 451 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 CBLN1P23435 193 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 GPR6P46095 362 aaPredicted RBP10.06□□□□□ -0.8
RTN3-203ENST00000341307 FMODQ06828 376 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 Q0VG73 95 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 FOXL1Q12952 345 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 SPIN3Q5JUX0 258 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 KCTD18Q6PI47 426 aaPredicted RBP10.06□□□□□ -0.8
RTN3-203ENST00000341307 FAM222BQ8WU58 562 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 SPACA9Q96E40 222 aaPredicted RBP10.06□□□□□ -0.8
RTN3-203ENST00000341307 MED29Q9NX70 200 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 FREM3P0C091 2139 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 CHD8Q9HCK8 2581 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 KNTC1P50748 2209 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 PRSS37A4D1T9 235 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 ZNF878C9JN71 531 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 MS4A18H0YCH9 400 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 CDIPTO14735 213 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 ZNF205O95201 554 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 IFNA1P01562 189 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 COX6A1P12074 109 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 AZU1P20160 251 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 OR3A4PP47883 348 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 RAB9AP51151 201 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 RAC3P60763 192 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 TRIP6Q15654 476 aaKnown RBP10.06□□□□□ -0.8
RTN3-203ENST00000341307 MS4A18Q3C1V0 323 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 PIP4P1Q86T03 277 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 HAPLN4Q86UW8 402 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 MRPL30Q8TCC3 161 aaKnown RBP10.06□□□□□ -0.8
RTN3-203ENST00000341307 WDR54Q9H977 334 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 TMEM38BQ9NVV0 291 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 FOXI3A8MTJ6 420 aaPredicted RBP10.05□□□□□ -0.8
RTN3-203ENST00000341307 SLC33A1O00400 549 aaPredicted RBP10.05□□□□□ -0.8
RTN3-203ENST00000341307 MLNRO43193 412 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 GDF1P27539 372 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 PRRX1P54821 245 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 PHLDA2Q53GA4 152 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 DHRS13Q6UX07 377 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 OR2Y1Q8NGV0 311 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 ST8SIA1Q92185 356 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 SIGLEC12Q96PQ1 595 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 EMC6Q9BV81 110 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 TXNIPQ9H3M7 391 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 CHCHD2Q9Y6H1 151 aaPredicted RBP10.05□□□□□ -0.8
RTN3-203ENST00000341307 ARHGAP21Q5T5U3 1957 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 A0A1W2PNR3 127 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 DKK1O94907 266 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 ZNF83P51522 516 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 PSG4Q00888 419 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 BAXQ07812 192 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 SLAQ13239 276 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 CXorf66Q5JRM2 361 aaPredicted RBP10.05□□□□□ -0.8
RTN3-203ENST00000341307 DNM1P34Q6PK57 102 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 OR1K1Q8NGR3 316 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 OR52N5Q8NH56 324 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 RNF138Q8WVD3 245 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 IMMP1LQ96LU5 166 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 DLL3Q9NYJ7 618 aa10.05□□□□□ -0.8
RTN3-203ENST00000341307 LOC102723996A0A087X1L8 192 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 IGKV1D-43A0A0B4J1Z2 117 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 VENTXO95231 258 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 CELA3BP08861 270 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 ZNF883P0CG24 379 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 ACP1P24666 158 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 SELENOVP59797 346 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 RELBQ01201 579 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 GTF3C1Q12789 2109 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 BVES-AS1Q5T3Y7 98 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 MRPL18Q9H0U6 180 aaKnown RBP10.04□□□□□ -0.8
RTN3-203ENST00000341307 NXT1Q9UKK6 140 aaKnown RBP10.04□□□□□ -0.8
RTN3-203ENST00000341307 COA3Q9Y2R0 106 aaPredicted RBP10.04□□□□□ -0.8
RTN3-203ENST00000341307 AMTP48728 403 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 MYBPHQ13203 477 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 TESK1Q15569 626 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 ABCA11PQ4W5N1 156 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 ASCL4Q6XD76 172 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 SGMS2Q8NHU3 365 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 ZNF286AQ9HBT8 521 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 MCTS1Q9ULC4 181 aaKnown RBP10.04□□□□□ -0.8
RTN3-203ENST00000341307 LOXL2Q9Y4K0 774 aa10.04□□□□□ -0.8
RTN3-203ENST00000341307 IGLV1-36A0A0B4J1U3 117 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 MUC21A0A0G2JKD1 596 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 MUC21A0A140T8X8 626 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 J3QR06 171 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 ZNF728P0DKX0 622 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 CCL3P10147 92 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 IGLL1P15814 213 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 MDH2P40926 338 aaKnown RBP10.03□□□□□ -0.8
RTN3-203ENST00000341307 KIAA1644Q3SXP7 199 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 ACSF3Q4G176 576 aaPredicted RBP10.03□□□□□ -0.8
RTN3-203ENST00000341307 MUC21Q5SSG8 566 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 LCN12Q6JVE5 192 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 UFSP1Q6NVU6 142 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 H1FNTQ75WM6 255 aaPredicted RBP10.03□□□□□ -0.8
RTN3-203ENST00000341307 COMMD2Q86X83 199 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 GATAD1Q8WUU5 269 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms