RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 OR4A16Q8NH70 328 aa8.46□□□□□ -1.06
RBFOX1-202ENST00000340209 R3HDM4Q96D70 268 aa8.46□□□□□ -1.06
RBFOX1-202ENST00000340209 EGLN1Q9GZT9 426 aa8.46□□□□□ -1.06
RBFOX1-202ENST00000340209 RPL31P62899 125 aaKnown RBP8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 PJVKQ0ZLH3 352 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 IGFBPL1Q8WX77 278 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 S1PR3Q99500 378 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 LYRM2Q9NU23 88 aaPredicted RBP8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 CISD1Q9NZ45 108 aaKnown RBP8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 NKX6-3A6NJ46 265 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 ENSAO43768 121 aaKnown RBP8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 TNFRSF1AP19438 455 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 PAX6P26367 422 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 MSMO1Q15800 293 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 SNX22Q96L94 193 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 SLX1AQ9BQ83 275 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 RBKSQ9H477 322 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 MBNL3Q9NUK0 354 aaKnown RBP8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 SLC25A10Q9UBX3 287 aaPredicted RBP8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 MARCH11A6NNE9 402 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 RNASEK-C17orf49H0YIS7 233 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 ZNF737O75373 536 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 IFNA4P05014 189 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 CD3EP07766 207 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 HOXA1P49639 335 aaPredicted RBP8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 ZNF134P52741 427 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 UBE2KP61086 200 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 CDSNQ15517 529 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 LYPD2Q6UXB3 125 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 OR5T1Q8NG75 326 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 RARRES2Q99969 163 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 NGBQ9NPG2 151 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 DCHS2Q6V1P9 2916 aa8.45□□□□□ -1.06
RBFOX1-202ENST00000340209 TRAV3A0A0B4J244 114 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 TMEM218A2RU14 115 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 A8MXK9 166 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 FAM157CP0CG43 387 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 RND3P61587 244 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 LRTM2Q8N967 370 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 RXFP4Q8TDU9 374 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 EDARADDQ8WWZ3 215 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 NKX6-2Q9C056 277 aaPredicted RBP8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 BARX1Q9HBU1 254 aaPredicted RBP8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 HES4Q9HCC6 221 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 GNG13Q9P2W3 67 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 C17orf100A8MU93 164 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 COX7A1P24310 79 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 CD200P41217 278 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 SLC38A11Q08AI6 406 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 ARL16Q0P5N6 197 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 ZNF273Q14593 569 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 ZNF880Q6PDB4 577 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 CLCC1Q96S66 551 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 QTRT1Q9BXR0 403 aaKnown RBP8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 ZNF665Q9H7R5 613 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 RPS10P5Q9NQ39 176 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 MMP26Q9NRE1 261 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 UQCC1Q9NVA1 299 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 NDRG3Q9UGV2 375 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 ITPR1Q14643 2758 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 FLNCQ14315 2725 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 NAV3Q8IVL0 2385 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 USP9YO00507 2555 aaPredicted RBP8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 H2AFB1P0C5Y9 115 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 F2RL1P55085 397 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 CCL20P78556 96 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 MRPS11P82912 194 aaKnown RBP8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 PUSL1Q8N0Z8 303 aaKnown RBP8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 HCFC1P51610 2035 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 C9JQL5 133 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 K7N7A8 449 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 GZMHP20718 246 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 NPBWR1P48145 328 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 SULT1A2P50226 295 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 Q6ZS49 121 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 DTD1Q8TEA8 209 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 VSIRQ9H7M9 311 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 SLC25A22Q9H936 323 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 PRELID3BQ9Y3B1 194 aa8.44□□□□□ -1.06
RBFOX1-202ENST00000340209 A0A1B0GU03 582 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 GUK1Q16774 197 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 MST1LQ2TV78 715 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 ZCCHC14Q8WYQ9 949 aaKnown RBP8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 OR6C3Q9NZP0 311 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 AUP1Q9Y679 476 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 PPIAL4EA0A075B759 164 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 E7EQL1 145 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 PPIAL4DF5H284 164 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 IGHV3-48P01763 117 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 PPIAL4FP0DN26 164 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 ADCYAP1P18509 176 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 MORN2Q502X0 79 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 UBAC2Q8NBM4 344 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 OR10X1Q8NGY0 326 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 IL19Q9UHD0 177 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 PPIAL4AQ9Y536 164 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 TRBV6-6A0A0A6YYG2 114 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 ID3Q02535 119 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 ZNF674Q2M3X9 581 aa8.43□□□□□ -1.06
RBFOX1-202ENST00000340209 ZFP82Q8N141 532 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms