RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 BOKQ9UMX3 212 aaPredicted RBP13.58□□□□□ -0.24
SCARB1-202ENST00000339570 PSG11Q9UQ72 335 aa13.58□□□□□ -0.24
SCARB1-202ENST00000339570 DMXL2Q8TDJ6 3036 aa13.58□□□□□ -0.24
SCARB1-202ENST00000339570 LRP5LA4QPB2 252 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 GFRA1P56159 465 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 PAX5Q02548 391 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 COLCA1Q6ZS62 124 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 CYP2G1PQ6ZSU1 146 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 TDHQ8IZJ6 230 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 TRAPPC1Q9Y5R8 145 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 TNCP24821 2201 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 NPPCP23582 126 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 SLC35B1P78383 322 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 ARG2P78540 354 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 KRTAP27-1Q3LI81 207 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 PRR31Q5SQ13 230 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 DPPA3Q6W0C5 159 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 H2BFWTQ7Z2G1 175 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 OR2M7Q8NG81 312 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 CDH20Q9HBT6 801 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 AGFG2O95081 481 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 HRASP01112 189 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 SERF2P84101 59 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 PRAMEF6Q5VXH4 476 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 TEX38Q6PEX7 206 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 KCNIP1Q9NZI2 227 aa13.57□□□□□ -0.24
SCARB1-202ENST00000339570 ZNF318Q5VUA4 2279 aa13.56□□□□□ -0.24
SCARB1-202ENST00000339570 TRAV1-1A0A0B4J248 108 aa13.56□□□□□ -0.24
SCARB1-202ENST00000339570 TAS2R60P59551 318 aa13.56□□□□□ -0.24
SCARB1-202ENST00000339570 ATP1A1-AS1Q5TC04 95 aa13.56□□□□□ -0.24
SCARB1-202ENST00000339570 SP5Q6BEB4 398 aaPredicted RBP13.56□□□□□ -0.24
SCARB1-202ENST00000339570 LOXL2Q9Y4K0 774 aa13.56□□□□□ -0.24
SCARB1-202ENST00000339570 A0A1W2PPV4 95 aa13.56□□□□□ -0.24
SCARB1-202ENST00000339570 A6NNC1 897 aa13.56□□□□□ -0.24
SCARB1-202ENST00000339570 A8MWP6 167 aa13.56□□□□□ -0.24
SCARB1-202ENST00000339570 LHX2P50458 406 aa13.56□□□□□ -0.24
SCARB1-202ENST00000339570 OR1C1Q15619 314 aa13.56□□□□□ -0.24
SCARB1-202ENST00000339570 DCAF12Q5T6F0 453 aa13.56□□□□□ -0.24
SCARB1-202ENST00000339570 PINX1Q96BK5 328 aaKnown RBP13.56□□□□□ -0.24
SCARB1-202ENST00000339570 ACTR3CQ9C0K3 210 aaPredicted RBP13.56□□□□□ -0.24
SCARB1-202ENST00000339570 FAM103A1Q9BTL3 118 aaKnown RBP13.56□□□□□ -0.24
SCARB1-202ENST00000339570 METRNQ9UJH8 293 aa13.56□□□□□ -0.24
SCARB1-202ENST00000339570 SLC17A3O00476 420 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 COX5AP20674 150 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 GCH1P30793 250 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 CDC34P49427 236 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FABP6P51161 128 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 NEIL1Q96FI4 390 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-202ENST00000339570 CTXND1A0A1B0GTU2 59 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A10PA6NDY2 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A18PA6NE21 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A16PA6NEW6 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A20PA6NIJ5 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A8PA6NJQ4 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A7PA6NKC0 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A22PA8MWA6 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A12PA8MX19 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A5PA8MXJ8 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A23PA8MXZ1 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 IL18BPO95998 194 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A15PP0C7V4 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A13PP0C7W8 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A14PP0C7W9 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 FAM90A24PP0C7X0 464 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 IL3RAP26951 378 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 Q6P435 159 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 SGMS2Q8NHU3 365 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 LEAP2Q969E1 77 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 TMEM18Q96B42 140 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 C5orf30Q96GV9 206 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 PSMG3Q9BT73 122 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-202ENST00000339570 NPCDR1Q9BY65 106 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 TTTY12Q9BZ98 90 aa13.55□□□□□ -0.24
SCARB1-202ENST00000339570 RIMS4Q9H426 269 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-202ENST00000339570 C12orf77C9JDV5 145 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 DNPH1O43598 174 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 CLDN18P56856 261 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 SLC10A1Q14973 349 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 TMEM251Q8N6I4 163 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 GALMQ96C23 342 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 CTDSP1Q9GZU7 261 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 PILRBQ9UKJ0 227 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 PKDREJQ9NTG1 2253 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 PCNX1Q96RV3 2341 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 ACTL6BO94805 426 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 HBZP02008 142 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 TDRG1Q3Y452 100 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 P2RX4Q99571 388 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 IL17BQ9UHF5 180 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 J3QT63 122 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 FRMD6-AS1P0C7T7 363 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 CBLN1P23435 193 aa13.54□□□□□ -0.24
SCARB1-202ENST00000339570 QTRT1Q9BXR0 403 aaKnown RBP13.54□□□□□ -0.24
SCARB1-202ENST00000339570 SH2D1BO14796 132 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 FCGR3BO75015 233 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 NEURL1O76050 574 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 HAND1O96004 215 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 CNN1P51911 297 aaKnown RBP13.53□□□□□ -0.24
SCARB1-202ENST00000339570 TOMM20LQ6UXN7 152 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 SLC25A40Q8TBP6 338 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms