RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 PPIHO43447 177 aaKnown RBP12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 ARG1P05089 322 aa12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 SRP19P09132 144 aaKnown RBP12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 ELLP55199 621 aaPredicted RBP12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 ZNF726P1Q15940 193 aa12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 UTF1Q5T230 341 aa12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 DUX4L9Q6RFH8 374 aaPredicted RBP12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 FAM90A1Q86YD7 464 aa12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 C15orf54Q8N8G6 183 aa12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 CYB561D1Q8N8Q1 229 aa12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 HIST1H2BAQ96A08 127 aa12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 HSD17B10Q99714 261 aaKnown RBP12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 FAM234AQ9H0X4 552 aa12.35□□□□□ -0.43
CLCNKA-201ENST00000331433 A0A1W2PPH5 198 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 MARCH11A6NNE9 402 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 A8MXE2 369 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 ATXN7O15265 892 aaPredicted RBP12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 GZMHP20718 246 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 NBL1P41271 181 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 RAB13P51153 203 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 FGF8P55075 233 aaPredicted RBP12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 MORN2Q502X0 79 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 ZNF506Q5JVG8 444 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 DTD1Q8TEA8 209 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 RBMXL1Q96E39 390 aaKnown RBP12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 PSMG3Q9BT73 122 aaPredicted RBP12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 GNG13Q9P2W3 67 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 A0A1W2PPE2 198 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 LHBP01229 141 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 HBE1P02100 147 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 DUTP33316 252 aaKnown RBP12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 ZNF134P52741 427 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 RAB2AP61019 212 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 RPL39P5Q59GN2 51 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 KDF1Q8NAX2 398 aaPredicted RBP12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 PPP1R35Q8TAP8 253 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 EDARADDQ8WWZ3 215 aa12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 TAF15Q92804 592 aaKnown RBP eCLIP12.34□□□□□ -0.43
CLCNKA-201ENST00000331433 RAB29O14966 203 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 FCGR3BO75015 233 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 CCKARP32238 428 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 LOXL3P58215 753 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 RHEBQ15382 184 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 KRTCAP3Q53RY4 240 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 LEAP2Q969E1 77 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 ABHD17AQ96GS6 310 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 RCC1LQ96I51 464 aaKnown RBP12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 HIPK2Q9H2X6 1198 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 ZNF665Q9H7R5 613 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 PAX6P26367 422 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 ZNF787Q6DD87 383 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 SSX9Q7RTT3 188 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 TCTEX1D1Q8N7M0 179 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 DEFB108BQ8NET1 73 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 JPT1Q9UK76 154 aa12.33□□□□□ -0.44
CLCNKA-201ENST00000331433 DSCAML1Q8TD84 2053 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 TRAV1-1A0A0B4J248 108 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 ZFP92A6NM28 416 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 CEBPZOSA8MTT3 80 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 MKRN2OSH3BPM6 223 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 H3BQ15 152 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 M0R1X1 148 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 CYB5R3P00387 301 aaPredicted RBP12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 HSPB1P04792 205 aaKnown RBP12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 OR8U8P0C7N1 319 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 CD40P25942 277 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 OR2B8PP59922 312 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 C3orf36Q3SXR2 165 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 R3HDM4Q96D70 268 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 GCM1Q9NP62 436 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 SH3BGRL2Q9UJC5 107 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 LAMP3Q9UQV4 416 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 SLC31A2O15432 143 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 IGHV1-46P01743 117 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 OR9G9P0C7N8 305 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 SERF2P84101 59 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 TGIF2LYQ8IUE0 185 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 VKORC1L1Q8N0U8 176 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 QTRT1Q9BXR0 403 aaKnown RBP12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 EGLN1Q9GZT9 426 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 CALYQ9NYX4 217 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 TP53TG5Q9Y2B4 290 aa12.32□□□□□ -0.44
CLCNKA-201ENST00000331433 LOC102723971A0A1B0GUV8 181 aa12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 A0A1W2PPE3 182 aa12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 YPEL1O60688 119 aa12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 RPS23P62266 143 aaKnown RBP12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 TNFAIP6P98066 277 aaPredicted RBP12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 HABP2Q14520 560 aaPredicted RBP12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 CR1LQ2VPA4 569 aa12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 DOLPP1Q86YN1 238 aa12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 FAM24BQ8N5W8 94 aa12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 Q8TCH9 128 aa12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 YPEL2Q96QA6 119 aa12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 IFI27L2Q9H2X8 130 aa12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 A0A0G2JNJ9 132 aa12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 hCG_1809904A0A1W2PP81 198 aa12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 A0A1W2PR64 198 aa12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 A0A1W2PRV1 198 aa12.31□□□□□ -0.44
CLCNKA-201ENST00000331433 PMS2P5A8MQ11 134 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms