RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 YPEL1O60688 119 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 ZG16O60844 167 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 CRYAAP02489 173 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 MEOX2P50222 304 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 KLF3P57682 345 aaPredicted RBP18.61■□□□□ 0.57
PNKP-201ENST00000322344 MSMPQ1L6U9 139 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 RBMS3Q6XE24 437 aaKnown RBP18.61■□□□□ 0.57
PNKP-201ENST00000322344 S100PBPQ96BU1 408 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 YPEL2Q96QA6 119 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 DCTN5Q9BTE1 182 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 SLC39A9Q9NUM3 307 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 METTL1Q9UBP6 276 aaKnown RBP18.61■□□□□ 0.57
PNKP-201ENST00000322344 MARCH11A6NNE9 402 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 DEFB108AA8MXU0 73 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 RBMXL2O75526 392 aaKnown RBP18.61■□□□□ 0.57
PNKP-201ENST00000322344 C1orf185Q5T7R7 199 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 ZNF474Q6S9Z5 364 aaPredicted RBP18.61■□□□□ 0.57
PNKP-201ENST00000322344 Q6ZS92 163 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 LRP11Q86VZ4 500 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 GCSAMQ8N6F7 178 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 CA5BP1Q8WTZ4 195 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 R3HDM4Q96D70 268 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 MEGF10Q96KG7 1140 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 NCOR1P1Q9H4R4 102 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 GNG12Q9UBI6 72 aa18.61■□□□□ 0.57
PNKP-201ENST00000322344 CEBPZOSA8MTT3 80 aa18.6■□□□□ 0.57
PNKP-201ENST00000322344 S100A8P05109 93 aa18.6■□□□□ 0.57
PNKP-201ENST00000322344 DUTP33316 252 aaKnown RBP18.6■□□□□ 0.57
PNKP-201ENST00000322344 FGF8P55075 233 aaPredicted RBP18.6■□□□□ 0.57
PNKP-201ENST00000322344 VWC2Q2TAL6 325 aa18.6■□□□□ 0.57
PNKP-201ENST00000322344 MORN2Q502X0 79 aa18.6■□□□□ 0.57
PNKP-201ENST00000322344 KIAA2026Q5HYC2 2103 aa18.6■□□□□ 0.57
PNKP-201ENST00000322344 HPRT1P00492 218 aa18.59■□□□□ 0.57
PNKP-201ENST00000322344 GNB2P62879 340 aa18.59■□□□□ 0.57
PNKP-201ENST00000322344 AARDQ4LEZ3 155 aa18.59■□□□□ 0.57
PNKP-201ENST00000322344 IQCF2Q8IXL9 164 aa18.59■□□□□ 0.57
PNKP-201ENST00000322344 LHX4Q969G2 390 aa18.59■□□□□ 0.57
PNKP-201ENST00000322344 OR2V2Q96R30 315 aa18.59■□□□□ 0.57
PNKP-201ENST00000322344 RAB9BQ9NP90 201 aa18.59■□□□□ 0.57
PNKP-201ENST00000322344 FAM215AQ9Y5M1 114 aa18.59■□□□□ 0.57
PNKP-201ENST00000322344 ZNF727A8MUV8 499 aa18.59■□□□□ 0.57
PNKP-201ENST00000322344 F2RL2O00254 374 aa18.59■□□□□ 0.57
PNKP-201ENST00000322344 EIF3GO75821 320 aaKnown RBP eCLIP18.59■□□□□ 0.57
PNKP-201ENST00000322344 FGF7P21781 194 aa18.59■□□□□ 0.57
PNKP-201ENST00000322344 TIMP3P35625 211 aa18.59■□□□□ 0.57
PNKP-201ENST00000322344 NKX6-1P78426 367 aaPredicted RBP18.59■□□□□ 0.57
PNKP-201ENST00000322344 NCR3LG1Q68D85 454 aa18.59■□□□□ 0.57
PNKP-201ENST00000322344 RPP25LQ8N5L8 163 aaKnown RBP18.59■□□□□ 0.57
PNKP-201ENST00000322344 CTXND1A0A1B0GTU2 59 aa18.58■□□□□ 0.56
PNKP-201ENST00000322344 RBFOX2O43251 390 aaKnown RBP eCLIP18.58■□□□□ 0.561e-6■■■■□ 23.3
PNKP-201ENST00000322344 NDUFS6O75380 124 aaKnown RBP18.58■□□□□ 0.56
PNKP-201ENST00000322344 IGHV2-5P01817 119 aa18.58■□□□□ 0.56
PNKP-201ENST00000322344 CD55P08174 381 aa18.58■□□□□ 0.56
PNKP-201ENST00000322344 ZDHHC16Q969W1 377 aa18.58■□□□□ 0.56
PNKP-201ENST00000322344 LHBP01229 141 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 CRYABP02511 175 aaKnown RBP18.57■□□□□ 0.56
PNKP-201ENST00000322344 OR2B8PP59922 312 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 RTP5Q14D33 572 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 LTC4SQ16873 150 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 MOGAT3Q86VF5 341 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 TMEM242Q9NWH2 141 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 OR6C3Q9NZP0 311 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 IGLV3-9A0A075B6K5 115 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 A0A1W2PPE3 182 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 ITGB1BP1O14713 200 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 ELOBQ15370 118 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 ACSM6Q6P461 480 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 ZNF709Q8N972 641 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 SFXN3Q9BWM7 321 aa18.57■□□□□ 0.56
PNKP-201ENST00000322344 GTF3C1Q12789 2109 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 C17orf112F2Z3M2 114 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 IGKV1D-33P01593 117 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 IGKV1-33P01594 117 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 KIR2DS2P43631 304 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 FAM180AQ6UWF9 173 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 TCEAL7Q9BRU2 100 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 GAB2Q9UQC2 676 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 PTPRBP23467 1997 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 IGHV3OR15-7A0A075B7D8 119 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 PCP4L1A6NKN8 68 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 AP4M1O00189 453 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 FCGR3BO75015 233 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 GATA4P43694 442 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 RPS10P46783 165 aaKnown RBP18.56■□□□□ 0.56
PNKP-201ENST00000322344 RPP30P78346 268 aaKnown RBP18.56■□□□□ 0.56
PNKP-201ENST00000322344 FABP9Q0Z7S8 132 aa18.56■□□□□ 0.56
PNKP-201ENST00000322344 QTRT1Q9BXR0 403 aaKnown RBP18.56■□□□□ 0.56
PNKP-201ENST00000322344 ACTR3CQ9C0K3 210 aaPredicted RBP18.56■□□□□ 0.56
PNKP-201ENST00000322344 PROP1O75360 226 aa18.55■□□□□ 0.56
PNKP-201ENST00000322344 MDKP21741 143 aaPredicted RBP18.55■□□□□ 0.56
PNKP-201ENST00000322344 LOXL3P58215 753 aa18.55■□□□□ 0.56
PNKP-201ENST00000322344 LINC00205P59089 165 aa18.55■□□□□ 0.56
PNKP-201ENST00000322344 ALKBH2Q6NS38 261 aa18.55■□□□□ 0.56
PNKP-201ENST00000322344 OR10G9Q8NGN4 311 aa18.55■□□□□ 0.56
PNKP-201ENST00000322344 OR10G7Q8NGN6 311 aa18.55■□□□□ 0.56
PNKP-201ENST00000322344 OR52E5Q8NH55 327 aa18.55■□□□□ 0.56
PNKP-201ENST00000322344 Q8WTZ3 238 aa18.55■□□□□ 0.56
PNKP-201ENST00000322344 ITLN1Q8WWA0 313 aa18.55■□□□□ 0.56
PNKP-201ENST00000322344 NPCDR1Q9BY65 106 aa18.55■□□□□ 0.56
PNKP-201ENST00000322344 SDF2L1Q9HCN8 221 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms