RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 NECAP1Q8NC96 275 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 OR10P1Q8NGE3 313 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 SEBOXQ9HB31 216 aaPredicted RBP14.56□□□□□ -0.08
COL9A1-201ENST00000320755 MIOXQ9UGB7 285 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 VAX2Q9UIW0 290 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 IGKV3-15P01624 115 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 ZNF718Q3SXZ3 478 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 WNT2P09544 360 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 MAS1LP35410 378 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 MRGPRGQ86SM5 289 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 SMIM7Q9BQ49 75 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 ZNF251Q9BRH9 671 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 GNG12Q9UBI6 72 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 PPIHO43447 177 aaKnown RBP14.55□□□□□ -0.08
COL9A1-201ENST00000320755 DEFB109BQ30KR1 87 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 SMIM21Q3B7S5 101 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 FFAR4Q5NUL3 377 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 GFI1BQ5VTD9 330 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 LRP11Q86VZ4 500 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 VKORC1L1Q8N0U8 176 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 CD177Q8N6Q3 437 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 OR5T1Q8NG75 326 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 OR10G4Q8NGN3 311 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 OR10G9Q8NGN4 311 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 OR10G7Q8NGN6 311 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 PINX1Q96BK5 328 aaKnown RBP14.55□□□□□ -0.08
COL9A1-201ENST00000320755 FAM210BQ96KR6 192 aa14.55□□□□□ -0.08
COL9A1-201ENST00000320755 B2MP61769 119 aa14.54□□□□□ -0.08
COL9A1-201ENST00000320755 C1QL4Q86Z23 238 aa14.54□□□□□ -0.08
COL9A1-201ENST00000320755 PCNX1Q96RV3 2341 aa14.54□□□□□ -0.08
COL9A1-201ENST00000320755 FAM90A26D6RGX4 464 aa14.54□□□□□ -0.08
COL9A1-201ENST00000320755 FCGR3BO75015 233 aa14.54□□□□□ -0.08
COL9A1-201ENST00000320755 NCR3LG1Q68D85 454 aa14.54□□□□□ -0.08
COL9A1-201ENST00000320755 SIRT7Q9NRC8 400 aa14.54□□□□□ -0.08
COL9A1-201ENST00000320755 HIST1H2BKO60814 126 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 IFNA1P01562 189 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 IGHG3P01860 377 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 HIST1H2BJP06899 126 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 TUBG1P23258 451 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 HIST1H2BOP23527 126 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 PRDX2P32119 198 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 HIST1H2BBP33778 126 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 HIST1H2BDP58876 126 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 HIST1H2BCP62807 126 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 HIST2H2BEQ16778 126 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.53□□□□□ -0.08
COL9A1-201ENST00000320755 HIST1H2BHQ93079 126 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 HIST1H2BNQ99877 126 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 HIST1H2BMQ99879 126 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 TCEAL7Q9BRU2 100 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 TOLLIPQ9H0E2 274 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 SDF2L1Q9HCN8 221 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 IGHV2OR16-5A0A0B4J2B6 119 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 EGR1P18146 543 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 ZNF83P51522 516 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 ZNF709Q8N972 641 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 ZBTB34Q8NCN2 500 aa14.53□□□□□ -0.08
COL9A1-201ENST00000320755 SMCO3A2RU48 225 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 MARCH11A6NNE9 402 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 CLDN34H7C241 214 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 SPINT2O43291 252 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 EDDM3BP56851 147 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 CD81P60033 236 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 OR4F5Q8NH21 305 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 OR4F4Q96R69 305 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 TMEM147Q9BVK8 224 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 QTRT1Q9BXR0 403 aaKnown RBP14.52□□□□□ -0.08
COL9A1-201ENST00000320755 IGHV1-18A0A0C4DH31 117 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 CLDN14O95500 239 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 HOXA5P20719 270 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 SPRNQ5BIV9 151 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 WDR25Q64LD2 544 aaPredicted RBP14.52□□□□□ -0.08
COL9A1-201ENST00000320755 ZNRF1Q8ND25 227 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 LEAP2Q969E1 77 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 SARAFQ96BY9 339 aa14.52□□□□□ -0.08
COL9A1-201ENST00000320755 ZFHX2Q9C0A1 2572 aaPredicted RBP14.52□□□□□ -0.09
COL9A1-201ENST00000320755 IFITM10A6NMD0 228 aa14.52□□□□□ -0.09
COL9A1-201ENST00000320755 GPR12P47775 334 aa14.52□□□□□ -0.09
COL9A1-201ENST00000320755 S100A12P80511 92 aa14.52□□□□□ -0.09
COL9A1-201ENST00000320755 MEF2BQ02080 365 aaPredicted RBP14.52□□□□□ -0.09
COL9A1-201ENST00000320755 FAM201AQ5SY85 155 aa14.52□□□□□ -0.09
COL9A1-201ENST00000320755 HIPK2Q9H2X6 1198 aa14.52□□□□□ -0.09
COL9A1-201ENST00000320755 HCFC1P51610 2035 aa14.52□□□□□ -0.09
COL9A1-201ENST00000320755 TRAV17A0A0B4J275 112 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 CXorf65A6NEN9 183 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 GCSAMLQ5JQS6 135 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 C1orf87Q8N0U7 546 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 R3HDM4Q96D70 268 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 CYB5R3P00387 301 aaPredicted RBP14.51□□□□□ -0.09
COL9A1-201ENST00000320755 FTH1P19P0C7X4 201 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 S100A2P29034 98 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 PSMB3P49720 205 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 CTAG1AP78358 180 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 NKX6-1P78426 367 aaPredicted RBP14.51□□□□□ -0.09
COL9A1-201ENST00000320755 MSMPQ1L6U9 139 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 RPL39P5Q59GN2 51 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 FRZBQ92765 325 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 RAB24Q969Q5 203 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 GPR61Q9BZJ8 451 aa14.51□□□□□ -0.09
COL9A1-201ENST00000320755 WASF3Q9UPY6 502 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms