RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ARHGAP5-AS1Q96IT6 56 aa11□□□□□ -0.65
RPP40-201ENST00000319533 ABHD14AQ9BUJ0 271 aa11□□□□□ -0.65
RPP40-201ENST00000319533 MRPL20Q9BYC9 149 aaKnown RBP11□□□□□ -0.65
RPP40-201ENST00000319533 C12orf4Q9NQ89 552 aa11□□□□□ -0.65
RPP40-201ENST00000319533 AK3Q9UIJ7 227 aa11□□□□□ -0.65
RPP40-201ENST00000319533 MGAT4AQ9UM21 535 aa11□□□□□ -0.65
RPP40-201ENST00000319533 BIRC6Q9NR09 4857 aa11□□□□□ -0.65
RPP40-201ENST00000319533 CSMD3Q7Z407 3707 aa11□□□□□ -0.65
RPP40-201ENST00000319533 TRBV6-6A0A0A6YYG2 114 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 FOXI3A8MTJ6 420 aaPredicted RBP10.99□□□□□ -0.65
RPP40-201ENST00000319533 LDLRAD4O15165 306 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 YPEL1O60688 119 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 SPNP16150 400 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 ZNF182P17025 639 aaPredicted RBP10.99□□□□□ -0.65
RPP40-201ENST00000319533 SDC2P34741 201 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 PPP1CCP36873 323 aaKnown RBP10.99□□□□□ -0.65
RPP40-201ENST00000319533 GNMTQ14749 295 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 ZNF880Q6PDB4 577 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 TPRA1Q86W33 373 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 NR2C2APQ86WQ0 139 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 OR2AK2Q8NG84 335 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 DLX4Q92988 240 aaPredicted RBP10.99□□□□□ -0.65
RPP40-201ENST00000319533 RAB3CQ96E17 227 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 YPEL2Q96QA6 119 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 OR5B12Q96R08 314 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 CMSS1Q9BQ75 279 aaKnown RBP10.99□□□□□ -0.65
RPP40-201ENST00000319533 ZNF251Q9BRH9 671 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 PARP11Q9NR21 331 aa10.99□□□□□ -0.65
RPP40-201ENST00000319533 METTL21EPA6NDL7 271 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 NOTOA8MTQ0 251 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 LINC01619G3V211 115 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 SOX15O60248 233 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 FRMD6-AS1P0C7T7 363 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 RAB6AP20340 208 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 RPS19P39019 145 aaKnown RBP10.98□□□□□ -0.65
RPP40-201ENST00000319533 TMEM50BP56557 158 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 NDPQ00604 133 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 MXD1Q05195 221 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 ZNF660Q6AZW8 331 aaPredicted RBP10.98□□□□□ -0.65
RPP40-201ENST00000319533 ACSM6Q6P461 480 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 PECRQ9BY49 303 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 TOLLIPQ9H0E2 274 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 PTTG2Q9NZH5 202 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 FBXO7Q9Y3I1 522 aa10.98□□□□□ -0.65
RPP40-201ENST00000319533 HSPA12AO43301 675 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 SAP30O75446 220 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 LGALS1P09382 135 aaKnown RBP10.97□□□□□ -0.65
RPP40-201ENST00000319533 CD3GP09693 182 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 EGR2P11161 476 aaPredicted RBP10.97□□□□□ -0.65
RPP40-201ENST00000319533 GP9P14770 177 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 SLURP1P55000 103 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 HLA-DRB3P79483 266 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 FAM71F2Q6NXP2 309 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 OVCH2Q7RTZ1 564 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 C5orf24Q7Z6I8 188 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 TCTEX1D1Q8N7M0 179 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 OR6Q1Q8NGQ2 317 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 OR10R2Q8NGX6 335 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 PTX4Q96A99 478 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 HDHD3Q9BSH5 251 aaPredicted RBP10.97□□□□□ -0.65
RPP40-201ENST00000319533 ALX4Q9H161 411 aaPredicted RBP10.97□□□□□ -0.65
RPP40-201ENST00000319533 Q9N2K0 584 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 FOXA2Q9Y261 457 aaPredicted RBP10.97□□□□□ -0.65
RPP40-201ENST00000319533 NUBP2Q9Y5Y2 271 aa10.97□□□□□ -0.65
RPP40-201ENST00000319533 SAA2-SAA4A0A096LPE2 208 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 A0A0B4J203 849 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 SAA2P0DJI9 122 aaPredicted RBP10.96□□□□□ -0.65
RPP40-201ENST00000319533 LYL1P12980 280 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 ZBTB25P24278 435 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 OR3A3P47888 321 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 PLA2G7Q13093 441 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 ARL6IP1Q15041 203 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 PLAC9Q5JTB6 97 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 CITED4Q96RK1 184 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 TM2D3Q9BRN9 247 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 SLIRPQ9GZT3 109 aaKnown RBP10.96□□□□□ -0.65
RPP40-201ENST00000319533 ATG5Q9H1Y0 275 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 IFI27L2Q9H2X8 130 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 GHITMQ9H3K2 345 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 ZMAT4Q9H898 229 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 CCDC59Q9P031 241 aaKnown RBP10.96□□□□□ -0.65
RPP40-201ENST00000319533 KIAA1456Q9P272 454 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 SLC23A1Q9UHI7 598 aa10.96□□□□□ -0.65
RPP40-201ENST00000319533 A0A075B6Q4 140 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 IGHV4OR15-8A0A075B7B6 117 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 A0A087WW49 117 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 LCE6AA0A183 80 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 A0A1W2PN81 502 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 RRHO14718 337 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 ARPC1BO15143 372 aaKnown RBP10.95□□□□□ -0.66
RPP40-201ENST00000319533 OR8U9P0C7N5 309 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 GNB3P16520 340 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 CHRNA7P36544 502 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 CX3CL1P78423 397 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 MOGAT2Q3SYC2 334 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 SFXN4Q6P4A7 337 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 EDARADDQ8WWZ3 215 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 PIPOXQ9P0Z9 390 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 DAPK2Q9UIK4 370 aa10.95□□□□□ -0.66
RPP40-201ENST00000319533 A8MZ25 164 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms