RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 PCGF1Q9BSM1 259 aa9.15□□□□□ -0.95
TRIM59-201ENST00000309784 IFI27L2Q9H2X8 130 aa9.15□□□□□ -0.95
TRIM59-201ENST00000309784 PATZ1Q9HBE1 687 aaKnown RBP9.15□□□□□ -0.95
TRIM59-201ENST00000309784 SLC35D1Q9NTN3 355 aa9.15□□□□□ -0.95
TRIM59-201ENST00000309784 NUP50Q9UKX7 468 aa9.15□□□□□ -0.95
TRIM59-201ENST00000309784 IGHV3-72A0A0B4J1Y9 119 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 CEBPZOSA8MTT3 80 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 G3V3Q6 166 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 IGFBP2P18065 325 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 RPL12P30050 165 aaKnown RBP9.14□□□□□ -0.95
TRIM59-201ENST00000309784 PAX5Q02548 391 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 OR4A16Q8NH70 328 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 CD300LFQ8TDQ1 290 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 FAM168AQ92567 244 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 SHOXO15266 292 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 IFNA7P01567 189 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 RTL8BQ17RB0 113 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 CLCC1Q96S66 551 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 AGMATQ9BSE5 352 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 H0YIZ8 118 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 B3GALNT1O75752 331 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 IGLV2-14P01704 120 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 WNT2P09544 360 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 IGHV1-8P0DP01 117 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 DUTP33316 252 aaKnown RBP9.14□□□□□ -0.95
TRIM59-201ENST00000309784 OR2B8PP59922 312 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 OR2F1Q13607 317 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 PNKDQ8N490 385 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 LRTM2Q8N967 370 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 OR9G1Q8NH87 305 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 TNFSF18Q9UNG2 199 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 NOTCH2Q04721 2471 aa9.14□□□□□ -0.95
TRIM59-201ENST00000309784 MAP1AP78559 2803 aaPredicted RBP9.13□□□□□ -0.95
TRIM59-201ENST00000309784 E5RGE8 158 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 SNAPC5O75971 98 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 TMEM155Q4W5P6 130 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 MOB3BQ86TA1 216 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 TGIF2LXQ8IUE1 241 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 OR4S2Q8NH73 311 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 CORO2AQ92828 525 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 NCOR1P1Q9H4R4 102 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 TANC2Q9HCD6 1990 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 A0A0G2JRQ6 117 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 MARCH11A6NNE9 402 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 PRRX1P54821 245 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 LGALS4P56470 323 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 RPS16P62249 146 aaKnown RBP9.13□□□□□ -0.95
TRIM59-201ENST00000309784 CLINT1Q14677 625 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 RPEQ96AT9 228 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 PIMREGQ9BSJ6 248 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 ABCA1O95477 2261 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 J3QKU1 62 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 IGHV4-39P01824 125 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 THBS3P49746 956 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 RPL23AP62750 156 aaKnown RBP9.13□□□□□ -0.95
TRIM59-201ENST00000309784 ZNF585BQ52M93 769 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 ZNF787Q6DD87 383 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 C5orf30Q96GV9 206 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 ARPC5LQ9BPX5 153 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 SPOCK3Q9BQ16 436 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 TMEM133Q9H2Q1 129 aa9.13□□□□□ -0.95
TRIM59-201ENST00000309784 DUXBA0A1W2PPF3 345 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 FAM24AA6NFZ4 105 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 GPR37O15354 613 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 CHST1O43916 411 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 CST7O76096 145 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 SLC25A4P12235 298 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 HTR2BP41595 481 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 IFITM2Q01629 132 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 SESN1Q9Y6P5 492 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 MSGN1A6NI15 193 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 C22orf46C9J442 243 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 J3QR06 171 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 OPN1MWP04001 364 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 OPN1MW2P0DN77 364 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 OPN1MW3P0DN78 364 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 CGB3P0DN86 165 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 CGB7P0DN87 165 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 TMEM30BQ3MIR4 351 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 SPANXN5Q5MJ07 72 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 IL22RA2Q969J5 263 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 RNF126Q9BV68 326 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 UBQLN2Q9UHD9 624 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 A0A1B0GU03 582 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 DEDDO75618 318 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 FCN3O75636 299 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 HPRT1P00492 218 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 ADTRPQ96IZ2 230 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 RHOVQ96L33 236 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 CLEC7AQ9BXN2 247 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 MRPL20Q9BYC9 149 aaKnown RBP9.12□□□□□ -0.95
TRIM59-201ENST00000309784 HILPDAQ9Y5L2 63 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 POMT1Q9Y6A1 747 aa9.12□□□□□ -0.95
TRIM59-201ENST00000309784 IGKV1-39P01597 117 aa9.11□□□□□ -0.95
TRIM59-201ENST00000309784 IGKV1-5P01602 117 aa9.11□□□□□ -0.95
TRIM59-201ENST00000309784 IGKV1D-39P04432 117 aa9.11□□□□□ -0.95
TRIM59-201ENST00000309784 ARG1P05089 322 aa9.11□□□□□ -0.95
TRIM59-201ENST00000309784 NQO2P16083 231 aa9.11□□□□□ -0.95
TRIM59-201ENST00000309784 CR1LQ2VPA4 569 aa9.11□□□□□ -0.95
TRIM59-201ENST00000309784 SLC25A48Q6ZT89 311 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms