RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 SAT2Q96F10 170 aaPredicted RBP17.52■□□□□ 0.4
ATG4D-201ENST00000309469 GINS3Q9BRX5 216 aa17.52■□□□□ 0.4
ATG4D-201ENST00000309469 GAL3ST2Q9H3Q3 398 aa17.52■□□□□ 0.4
ATG4D-201ENST00000309469 NARFLQ9H6Q4 476 aa17.52■□□□□ 0.4
ATG4D-201ENST00000309469 RPUSD1Q9UJJ7 312 aaKnown RBP17.52■□□□□ 0.4
ATG4D-201ENST00000309469 NUP50Q9UKX7 468 aa17.52■□□□□ 0.4
ATG4D-201ENST00000309469 WSB1Q9Y6I7 421 aa17.52■□□□□ 0.4
ATG4D-201ENST00000309469 RAB29O14966 203 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 NDUFA2O43678 99 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 SULT1A2P50226 295 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 PPOXP50336 477 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 TUSC1Q2TAM9 212 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 MIDNQ504T8 468 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.51■□□□□ 0.39
ATG4D-201ENST00000309469 OR10A7Q8NGE5 316 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 SUN5Q8TC36 379 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 CTSZQ9UBR2 303 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 RAB19A4D1S5 217 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 DVL1O14640 695 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 TXNL1O43396 289 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 FCGR3BO75015 233 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 CST7O76096 145 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 TMEM200BQ69YZ2 307 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 C1orf229Q6ZS94 237 aaPredicted RBP17.51■□□□□ 0.39
ATG4D-201ENST00000309469 SMIM8Q96KF7 97 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.51■□□□□ 0.39
ATG4D-201ENST00000309469 PLA2G2EQ9NZK7 142 aa17.51■□□□□ 0.39
ATG4D-201ENST00000309469 NBEAQ8NFP9 2946 aa17.5■□□□□ 0.39
ATG4D-201ENST00000309469 ROS1P08922 2347 aa17.5■□□□□ 0.39
ATG4D-201ENST00000309469 MED6O75586 246 aa17.5■□□□□ 0.39
ATG4D-201ENST00000309469 HPRT1P00492 218 aa17.5■□□□□ 0.39
ATG4D-201ENST00000309469 IAPPP10997 89 aa17.5■□□□□ 0.39
ATG4D-201ENST00000309469 GNLYP22749 145 aa17.5■□□□□ 0.39
ATG4D-201ENST00000309469 COL8A2P25067 703 aa17.5■□□□□ 0.39
ATG4D-201ENST00000309469 UQCRFS1P47985 274 aa17.5■□□□□ 0.39
ATG4D-201ENST00000309469 CLINT1Q14677 625 aa17.5■□□□□ 0.39
ATG4D-201ENST00000309469 UQCC3Q6UW78 93 aa17.5■□□□□ 0.39
ATG4D-201ENST00000309469 H2BFWTQ7Z2G1 175 aa17.5■□□□□ 0.39
ATG4D-201ENST00000309469 OR5C1Q8NGR4 320 aa17.5■□□□□ 0.39
ATG4D-201ENST00000309469 H1FXQ92522 213 aaKnown RBP17.5■□□□□ 0.39
ATG4D-201ENST00000309469 FAM122AQ96E09 287 aa17.5■□□□□ 0.39
ATG4D-201ENST00000309469 NUDT19A8MXV4 375 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 RBFOX2O43251 390 aaKnown RBP eCLIP17.49■□□□□ 0.39
ATG4D-201ENST00000309469 SCO1O75880 301 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 SEC11BP0C7V7 166 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 DYNLT3P51808 116 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 ZNF714Q96N38 554 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 PSENENQ9NZ42 101 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 HSPB7Q9UBY9 170 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 PRELID3BQ9Y3B1 194 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 SAA2-SAA4A0A096LPE2 208 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 LYNX1G3V0Z9 82 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 H3BP45 60 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 ZG16O60844 167 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 SAA2P0DJI9 122 aaPredicted RBP17.49■□□□□ 0.39
ATG4D-201ENST00000309469 LYNX1P0DP58 116 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 GNG10P50151 68 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 TAS2R30P59541 319 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 UBE2KP61086 200 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 MRPS11P82912 194 aaKnown RBP17.49■□□□□ 0.39
ATG4D-201ENST00000309469 TNFRSF9Q07011 255 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 ZNF266Q14584 549 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 LYG1Q8N1E2 194 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 TMEM217Q8N7C4 229 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 R3HDM4Q96D70 268 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 S1PR3Q99500 378 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 ZNF251Q9BRH9 671 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 MMP26Q9NRE1 261 aa17.49■□□□□ 0.39
ATG4D-201ENST00000309469 MARCH11A6NNE9 402 aa17.48■□□□□ 0.39
ATG4D-201ENST00000309469 SPP1P10451 314 aa17.48■□□□□ 0.39
ATG4D-201ENST00000309469 CCL3L1P16619 93 aa17.48■□□□□ 0.39
ATG4D-201ENST00000309469 KIR2DS2P43631 304 aa17.48■□□□□ 0.39
ATG4D-201ENST00000309469 SULT1A1P50225 295 aa17.48■□□□□ 0.39
ATG4D-201ENST00000309469 ERVFRD-1P60508 538 aa17.48■□□□□ 0.39
ATG4D-201ENST00000309469 PXDC1Q5TGL8 231 aa17.48■□□□□ 0.39
ATG4D-201ENST00000309469 HEPN1Q6WQI6 88 aa17.48■□□□□ 0.39
ATG4D-201ENST00000309469 SLC25A48Q6ZT89 311 aaKnown RBP17.48■□□□□ 0.39
ATG4D-201ENST00000309469 STX12Q86Y82 276 aa17.48■□□□□ 0.39
ATG4D-201ENST00000309469 DDB2Q92466 427 aa17.48■□□□□ 0.39
ATG4D-201ENST00000309469 RBKSQ9H477 322 aa17.48■□□□□ 0.39
ATG4D-201ENST00000309469 DAOP14920 347 aa17.47■□□□□ 0.39
ATG4D-201ENST00000309469 BLOC1S1P78537 153 aa17.47■□□□□ 0.39
ATG4D-201ENST00000309469 STPG2Q8N412 459 aa17.47■□□□□ 0.39
ATG4D-201ENST00000309469 HSD17B11Q8NBQ5 300 aa17.47■□□□□ 0.39
ATG4D-201ENST00000309469 BPIFCQ8NFQ6 507 aa17.47■□□□□ 0.39
ATG4D-201ENST00000309469 ITLN2Q8WWU7 325 aaPredicted RBP17.47■□□□□ 0.39
ATG4D-201ENST00000309469 TANC2Q9HCD6 1990 aa17.47■□□□□ 0.39
ATG4D-201ENST00000309469 IL34Q6ZMJ4 242 aa17.47■□□□□ 0.39
ATG4D-201ENST00000309469 CBLN4Q9NTU7 201 aa17.47■□□□□ 0.39
ATG4D-201ENST00000309469 DSCAML1Q8TD84 2053 aa17.46■□□□□ 0.39
ATG4D-201ENST00000309469 FSTL3O95633 263 aa17.46■□□□□ 0.39
ATG4D-201ENST00000309469 AGAP20933 346 aa17.46■□□□□ 0.39
ATG4D-201ENST00000309469 THBS3P49746 956 aa17.46■□□□□ 0.39
ATG4D-201ENST00000309469 TMEM267Q0VDI3 215 aaPredicted RBP17.46■□□□□ 0.39
ATG4D-201ENST00000309469 NARS2Q96I59 477 aaKnown RBP17.46■□□□□ 0.39
ATG4D-201ENST00000309469 HRH4Q9H3N8 390 aa17.46■□□□□ 0.39
ATG4D-201ENST00000309469 ARFGEF3Q5TH69 2177 aa17.45■□□□□ 0.38
ATG4D-201ENST00000309469 ADTRPQ96IZ2 230 aa17.45■□□□□ 0.38
ATG4D-201ENST00000309469 SMG1Q96Q15 3661 aaKnown RBP17.45■□□□□ 0.38
ATG4D-201ENST00000309469 RAB1BQ9H0U4 201 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms