RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 FXYD6Q9H0Q3 95 aa17.84■□□□□ 0.45
HOXD4-201ENST00000306324 WASHC3Q9Y3C0 194 aa17.84■□□□□ 0.45
HOXD4-201ENST00000306324 NCBP2LA6PVI3 153 aaKnown RBP17.83■□□□□ 0.45
HOXD4-201ENST00000306324 AMY2AP04746 511 aa17.83■□□□□ 0.45
HOXD4-201ENST00000306324 DUTP33316 252 aaKnown RBP17.83■□□□□ 0.45
HOXD4-201ENST00000306324 ZNF45Q02386 682 aa17.83■□□□□ 0.45
HOXD4-201ENST00000306324 MEF2DQ14814 521 aa17.83■□□□□ 0.45
HOXD4-201ENST00000306324 TRIM63Q969Q1 353 aa17.83■□□□□ 0.45
HOXD4-201ENST00000306324 MOB4Q9Y3A3 225 aa17.83■□□□□ 0.45
HOXD4-201ENST00000306324 LINC00473A8K010 186 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 TNFSF12O43508 249 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 RAG2P55895 527 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 SCGB2B2Q4G0G5 96 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 ZNF818PQ6ZRF7 136 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 Q6ZSV7 163 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 Q8N6K4 173 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 GDPD1Q8N9F7 314 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 OR4C16Q8NGL9 310 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 OR4C13Q8NGP0 309 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 ADTRPQ96IZ2 230 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 GPHA2Q96T91 129 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 SLC35D1Q9NTN3 355 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 KRTAP21-3Q3LHN1 58 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 LINC00299Q6ZSB3 139 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 KCTD9Q7L273 389 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 TOMM5Q8N4H5 51 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 RITA1Q96K30 269 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 MDFIQ99750 246 aa17.82■□□□□ 0.44
HOXD4-201ENST00000306324 DISC1C4P0D8 188 aa17.81■□□□□ 0.44
HOXD4-201ENST00000306324 M0QZK8 103 aa17.81■□□□□ 0.44
HOXD4-201ENST00000306324 GNRHRP30968 328 aa17.81■□□□□ 0.44
HOXD4-201ENST00000306324 F2RL1P55085 397 aa17.81■□□□□ 0.44
HOXD4-201ENST00000306324 BLCAPP62952 87 aa17.81■□□□□ 0.44
HOXD4-201ENST00000306324 MMDQ15546 238 aa17.81■□□□□ 0.44
HOXD4-201ENST00000306324 MSMO1Q15800 293 aa17.81■□□□□ 0.44
HOXD4-201ENST00000306324 ABCA11PQ4W5N1 156 aa17.81■□□□□ 0.44
HOXD4-201ENST00000306324 AADACL3Q5VUY0 350 aa17.81■□□□□ 0.44
HOXD4-201ENST00000306324 PDPNQ86YL7 162 aa17.81■□□□□ 0.44
HOXD4-201ENST00000306324 ZBTB34Q8NCN2 500 aa17.81■□□□□ 0.44
HOXD4-201ENST00000306324 BORCS5Q969J3 196 aa17.81■□□□□ 0.44
HOXD4-201ENST00000306324 HSD17B10Q99714 261 aaKnown RBP17.81■□□□□ 0.44
HOXD4-201ENST00000306324 SH2D7A6NKC9 451 aaPredicted RBP17.8■□□□□ 0.44
HOXD4-201ENST00000306324 PEX14O75381 377 aa17.8■□□□□ 0.44
HOXD4-201ENST00000306324 NDUFA7O95182 113 aa17.8■□□□□ 0.44
HOXD4-201ENST00000306324 IGKV1-16P04430 117 aa17.8■□□□□ 0.44
HOXD4-201ENST00000306324 INPP1P49441 399 aa17.8■□□□□ 0.44
HOXD4-201ENST00000306324 AP3S2P59780 193 aa17.8■□□□□ 0.44
HOXD4-201ENST00000306324 RPL30P62888 115 aaKnown RBP17.8■□□□□ 0.44
HOXD4-201ENST00000306324 TAGLNQ01995 201 aaKnown RBP17.8■□□□□ 0.44
HOXD4-201ENST00000306324 RTL8BQ17RB0 113 aa17.8■□□□□ 0.44
HOXD4-201ENST00000306324 MFSD4AQ8N468 514 aa17.8■□□□□ 0.44
HOXD4-201ENST00000306324 BVESQ8NE79 360 aa17.8■□□□□ 0.44
HOXD4-201ENST00000306324 OR4F5Q8NH21 305 aa17.8■□□□□ 0.44
HOXD4-201ENST00000306324 TCTEX1D2Q8WW35 142 aa17.8■□□□□ 0.44
HOXD4-201ENST00000306324 RANBP3Q9H6Z4 567 aaPredicted RBP17.8■□□□□ 0.44
HOXD4-201ENST00000306324 AKIP1Q9NQ31 210 aa17.8■□□□□ 0.44
HOXD4-201ENST00000306324 MCUBQ9NWR8 336 aa17.8■□□□□ 0.44
HOXD4-201ENST00000306324 TMEM89A2RUT3 159 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 TSPAN9O75954 239 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 AMY1AP04745 511 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 ZNF735P0CB33 412 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 CNTFRP26992 372 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 PPP5CP53041 499 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 CBX3Q13185 183 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 EIF4EBP1Q13541 118 aaPredicted RBP17.79■□□□□ 0.44
HOXD4-201ENST00000306324 KLF9Q13886 244 aaPredicted RBP17.79■□□□□ 0.44
HOXD4-201ENST00000306324 BAK1Q16611 211 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 OR2B11Q5JQS5 317 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 TRIQKQ629K1 86 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 ZNF57Q68EA5 555 aaPredicted RBP17.79■□□□□ 0.44
HOXD4-201ENST00000306324 LPCAT3Q6P1A2 487 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 ZNF66Q6ZN08 573 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 LHFPL1Q86WI0 220 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 C5orf56Q8N8D9 126 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 OR8H1Q8NGG4 311 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 TERB2Q8NHR7 220 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 DDB2Q92466 427 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 FLYWCH2Q96CP2 140 aaKnown RBP17.79■□□□□ 0.44
HOXD4-201ENST00000306324 SDHCQ99643 169 aaPredicted RBP17.79■□□□□ 0.44
HOXD4-201ENST00000306324 PRSS22Q9GZN4 317 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 PLSCR3Q9NRY6 295 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 PRELID3BQ9Y3B1 194 aa17.79■□□□□ 0.44
HOXD4-201ENST00000306324 FGF16O43320 207 aa17.78■□□□□ 0.44
HOXD4-201ENST00000306324 FCGR3BO75015 233 aa17.78■□□□□ 0.44
HOXD4-201ENST00000306324 PGAM2P15259 253 aa17.78■□□□□ 0.44
HOXD4-201ENST00000306324 MDKP21741 143 aaPredicted RBP17.78■□□□□ 0.44
HOXD4-201ENST00000306324 RPS16P62249 146 aaKnown RBP17.78■□□□□ 0.44
HOXD4-201ENST00000306324 FOXL1Q12952 345 aa17.78■□□□□ 0.44
HOXD4-201ENST00000306324 ARSJQ5FYB0 599 aaPredicted RBP17.78■□□□□ 0.44
HOXD4-201ENST00000306324 C9orf152Q5JTZ5 239 aa17.78■□□□□ 0.44
HOXD4-201ENST00000306324 C11orf88Q6PI97 169 aa17.78■□□□□ 0.44
HOXD4-201ENST00000306324 CMTM1Q8IZ96 169 aa17.78■□□□□ 0.44
HOXD4-201ENST00000306324 S100ZQ8WXG8 99 aa17.78■□□□□ 0.44
HOXD4-201ENST00000306324 GPR31O00270 319 aa17.77■□□□□ 0.44
HOXD4-201ENST00000306324 RRASP10301 218 aa17.77■□□□□ 0.44
HOXD4-201ENST00000306324 FAUP35544 74 aaKnown RBP17.77■□□□□ 0.44
HOXD4-201ENST00000306324 UCP3P55916 312 aa17.77■□□□□ 0.44
HOXD4-201ENST00000306324 Q6ZS46 218 aa17.77■□□□□ 0.44
HOXD4-201ENST00000306324 SLC38A6Q8IZM9 456 aa17.77■□□□□ 0.44
HOXD4-201ENST00000306324 Q8N9W7 124 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms