RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 IGHV1OR15-9A0A0B4J2B8 117 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 TMEM229AB2RXF0 380 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 RRHO14718 337 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 CD1AP06126 327 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 CCL3P10147 92 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 EFNB2P52799 333 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 ZNF345Q14585 488 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 CXorf66Q5JRM2 361 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-201ENST00000302528 C1orf174Q8IYL3 243 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 OR11H7Q8NGC8 314 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 EEF1AKMT3Q96AZ1 226 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 OR51M1Q9H341 326 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 DNAJC4Q9NNZ3 241 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 STRCQ7RTU9 1775 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 CFDP00746 253 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-201ENST00000302528 UCNP55089 124 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 KIAA1644Q3SXP7 199 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 C9orf50Q5SZB4 431 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 PMS2CLQ68D20 193 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 ZNF414Q96IQ9 312 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 RP1L1Q8IWN7 2480 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-201ENST00000302528 FOXI3A8MTJ6 420 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-201ENST00000302528 H3BTX0 84 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 FGF5P12034 268 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 CCL4P13236 92 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 RNASEH2CQ8TDP1 164 aaKnown RBP8.98□□□□□ -0.97
CLIP1-201ENST00000302528 OR5AC2Q9NZP5 309 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 STRCP1A6NGW2 1772 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 MALP21145 153 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 HBBP68871 147 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 LCN2P80188 198 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 ZNF645Q8N7E2 425 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 AICDAQ9GZX7 198 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 PLAC1Q9HBJ0 212 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 TMEM106BQ9NUM4 274 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 CACNA1CQ13936 2221 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 C1QAP02745 245 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 C8orf88P0DMB2 117 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 MUC1P15941 1255 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-201ENST00000302528 DDTP30046 118 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 MPV17P39210 176 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 NEUROG1Q92886 237 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 SHANK3Q9BYB0 1731 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 DSPPQ9NZW4 1301 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 H0Y980 276 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 HSPB1P04792 205 aaKnown RBP8.98□□□□□ -0.97
CLIP1-201ENST00000302528 TCF23Q7RTU1 214 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 KCNS1Q96KK3 526 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 ARFGEF1Q9Y6D6 1849 aa8.98□□□□□ -0.97
CLIP1-201ENST00000302528 ASPDHA6ND91 283 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 CELA2BP08218 269 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-201ENST00000302528 KLK2P20151 261 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 HMGA2P52926 109 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 STARD6P59095 220 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 C18orf15Q96N68 181 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 DDA1Q9BW61 102 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 TLNRD1Q9H1K6 362 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 CBLN4Q9NTU7 201 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 HOXB3P14651 431 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-201ENST00000302528 TMEM252Q8N6L7 170 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 OR51G1Q8NGK1 321 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 CISD1Q9NZ45 108 aaKnown RBP8.97□□□□□ -0.97
CLIP1-201ENST00000302528 FLRT3Q9NZU0 649 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 ASCC3Q8N3C0 2202 aaKnown RBP8.97□□□□□ -0.97
CLIP1-201ENST00000302528 TPRP12270 2363 aaKnown RBP8.97□□□□□ -0.97
CLIP1-201ENST00000302528 SLX4Q8IY92 1834 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 CRYBB3P26998 211 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 RPL34P49207 117 aaKnown RBP8.97□□□□□ -0.97
CLIP1-201ENST00000302528 QTRT1Q9BXR0 403 aaKnown RBP8.97□□□□□ -0.97
CLIP1-201ENST00000302528 R3HDMLQ9H3Y0 253 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 TRAV12-3A0A0B4J271 114 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 C7orf66A4D0T2 115 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 APOMO95445 188 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 VSIG10L2P0DP72 767 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 AGAP20933 346 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 MAP1BP46821 2468 aaKnown RBP8.97□□□□□ -0.97
CLIP1-201ENST00000302528 GOLT1AQ6ZVE7 132 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 MARVELD3Q96A59 401 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 KCNK7Q9Y2U2 307 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 TGIF2-C20orf24A0A0A6YYL0 155 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 SPAARA0A1B0GVQ0 90 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 M0R381 172 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 NTN1O95631 604 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 VN1R4Q7Z5H5 301 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 ITLN1Q8WWA0 313 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 ITLN2Q8WWU7 325 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-201ENST00000302528 FAM60AQ9NP50 221 aa8.97□□□□□ -0.97
CLIP1-201ENST00000302528 A0A1B0GV90 55 aa8.96□□□□□ -0.97
CLIP1-201ENST00000302528 CDK2AP2O75956 126 aa8.96□□□□□ -0.97
CLIP1-201ENST00000302528 TYMSP04818 313 aa8.96□□□□□ -0.97
CLIP1-201ENST00000302528 UCP2P55851 309 aa8.96□□□□□ -0.97
CLIP1-201ENST00000302528 RPS11P62280 158 aaKnown RBP eCLIP8.96□□□□□ -0.97
CLIP1-201ENST00000302528 SRSF5Q13243 272 aaKnown RBP8.96□□□□□ -0.97
CLIP1-201ENST00000302528 FAM209BQ5JX69 171 aa8.96□□□□□ -0.97
CLIP1-201ENST00000302528 DUX3Q96PT4 197 aa8.96□□□□□ -0.97
CLIP1-201ENST00000302528 OPN3Q9H1Y3 402 aaPredicted RBP8.96□□□□□ -0.97
CLIP1-201ENST00000302528 COL16A1Q07092 1604 aaPredicted RBP8.96□□□□□ -0.97
CLIP1-201ENST00000302528 REG1AP05451 166 aa8.96□□□□□ -0.97
CLIP1-201ENST00000302528 LIPFP07098 398 aa8.96□□□□□ -0.97
CLIP1-201ENST00000302528 ARL14EPLP0DKL9 152 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms