RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 TMEM265A0A087WTH1 108 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 ZIC3O60481 467 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 PGLYRP1O75594 196 aaPredicted RBP12.23□□□□□ -0.45
CDT1-201ENST00000301019 IGHV3-9P01782 118 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 UBE2NP61088 152 aaKnown RBP12.23□□□□□ -0.45
CDT1-201ENST00000301019 PHYHD1Q5SRE7 291 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 NEUROG1Q92886 237 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 BMFQ96LC9 184 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 TM2D1Q9BX74 207 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 CLEC7AQ9BXN2 247 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 DECR2Q9NUI1 292 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 CLEC5AQ9NY25 188 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 PTRH2Q9Y3E5 179 aaKnown RBP12.23□□□□□ -0.45
CDT1-201ENST00000301019 ADAMTS9Q9P2N4 1935 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 GAGE12BA1L429 117 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 GATA2P23769 480 aaPredicted RBP12.23□□□□□ -0.45
CDT1-201ENST00000301019 CD24P25063 80 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 HBG1P69891 147 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 HBG2P69892 147 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 LRRC75BQ2VPJ9 315 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 HES3Q5TGS1 186 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 OR10G8Q8NGN5 311 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 ADIPOR1Q96A54 375 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 PLPPR2Q96GM1 343 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 GMPPAQ96IJ6 420 aaPredicted RBP12.23□□□□□ -0.45
CDT1-201ENST00000301019 GSX1Q9H4S2 264 aaPredicted RBP12.23□□□□□ -0.45
CDT1-201ENST00000301019 CD207Q9UJ71 328 aa12.23□□□□□ -0.45
CDT1-201ENST00000301019 ALG1L2C9J202 215 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 CCL2P13500 99 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 C9orf135Q5VTT2 229 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 GPR27Q9NS67 375 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 MED12LQ86YW9 2145 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 NRASP01111 189 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 CELA3BP08861 270 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 GPR6P46095 362 aaPredicted RBP12.22□□□□□ -0.45
CDT1-201ENST00000301019 GABRA6Q16445 453 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 ACSF3Q4G176 576 aaPredicted RBP12.22□□□□□ -0.45
CDT1-201ENST00000301019 DOLPP1Q86YN1 238 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 KIR3DL3Q8N743 410 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 A0A1W2PS18 150 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 hDV102S1A0JD36 115 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 IGLL1P15814 213 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 CTRLP40313 264 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 CA7P43166 264 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 ZNF816Q0VGE8 651 aaPredicted RBP12.22□□□□□ -0.45
CDT1-201ENST00000301019 Q6ZSR6 202 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 WDR5BQ86VZ2 330 aa12.22□□□□□ -0.45
CDT1-201ENST00000301019 RNASE7Q9H1E1 156 aaKnown RBP12.22□□□□□ -0.45
CDT1-201ENST00000301019 SLC25A6P12236 298 aa12.21□□□□□ -0.45
CDT1-201ENST00000301019 CD99P14209 185 aa12.21□□□□□ -0.45
CDT1-201ENST00000301019 TRIM61Q5EBN2 209 aa12.21□□□□□ -0.45
CDT1-201ENST00000301019 STUMQ69YW2 141 aa12.21□□□□□ -0.45
CDT1-201ENST00000301019 NIT1Q86X76 327 aa12.21□□□□□ -0.45
CDT1-201ENST00000301019 OR56B2PQ8NGI1 322 aa12.21□□□□□ -0.45
CDT1-201ENST00000301019 TMEM56Q96MV1 263 aa12.21□□□□□ -0.45
CDT1-201ENST00000301019 FNDC4Q9H6D8 234 aaPredicted RBP12.21□□□□□ -0.45
CDT1-201ENST00000301019 OR1A1Q9P1Q5 309 aa12.21□□□□□ -0.45
CDT1-201ENST00000301019 TMEM56-RWDD3S4R434 201 aa12.21□□□□□ -0.45
CDT1-201ENST00000301019 DSPP15924 2871 aaKnown RBP12.21□□□□□ -0.45
CDT1-201ENST00000301019 CIDEAO60543 219 aa12.21□□□□□ -0.46
CDT1-201ENST00000301019 PDCD6O75340 191 aa12.21□□□□□ -0.46
CDT1-201ENST00000301019 TYMSP04818 313 aa12.21□□□□□ -0.46
CDT1-201ENST00000301019 GABRA2P47869 451 aa12.21□□□□□ -0.46
CDT1-201ENST00000301019 ZNF808Q8N4W9 903 aaPredicted RBP12.21□□□□□ -0.46
CDT1-201ENST00000301019 COPS7AQ9UBW8 275 aa12.21□□□□□ -0.46
CDT1-201ENST00000301019 PLCE1Q9P212 2302 aa12.21□□□□□ -0.46
CDT1-201ENST00000301019 FER1L5A0AVI2 2057 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 MYF5P13349 255 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 RSPO1Q2MKA7 263 aaPredicted RBP12.2□□□□□ -0.46
CDT1-201ENST00000301019 TCTEX1D1Q8N7M0 179 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 OR13H1Q8NG92 308 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 SSC4DQ8WTU2 575 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 LOC400499M0QZD8 3231 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 IGKV1-6A0A0C4DH72 117 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 LIPT2A6NK58 231 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 TMEM250H0YL14 139 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 FBLP22087 321 aaKnown RBP12.2□□□□□ -0.46
CDT1-201ENST00000301019 LCN2P80188 198 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 C20orf204Q6ZNR8 217 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 ZNF611Q8N823 705 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 LMX1AQ8TE12 382 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 SSBP3Q9BWW4 388 aaPredicted RBP12.2□□□□□ -0.46
CDT1-201ENST00000301019 DMDP11532 3685 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 IGHV5-51A0A0C4DH38 117 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 A0A1W2PPV4 95 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 FRG2CA6NGY1 282 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 F2RP25116 425 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 PSG7Q13046 419 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 RNASEKQ6P5S7 137 aaKnown RBP12.2□□□□□ -0.46
CDT1-201ENST00000301019 AGBL5Q8NDL9 886 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 SLC24A4Q8NFF2 622 aa12.2□□□□□ -0.46
CDT1-201ENST00000301019 SEPSECSQ9HD40 501 aaKnown RBP12.2□□□□□ -0.46
CDT1-201ENST00000301019 A0A087X0K7 114 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 CA2P00918 260 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 IGKV1-39P01597 117 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 IGKV1D-39P04432 117 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 TMEM144Q7Z5S9 345 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 OR1N2Q8NGR9 330 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 CORO2AQ92828 525 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 UCN2Q96RP3 112 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms