RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 TMEM230Q96A57 120 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 CCDC32Q9BV29 185 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 HEXA-AS1Q9H8Q6 139 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 UNKLQ9H9P5 680 aaKnown RBP5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 PALMDQ9NP74 551 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 NUP50Q9UKX7 468 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 MGAT4AQ9UM21 535 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 OR2W1Q9Y3N9 320 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 FBN1P35555 2871 aaKnown RBP5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 SONP18583 2426 aaKnown RBP5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 TRAV6A0A075B6T7 132 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 LINC00473A8K010 186 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 DISC1C4P0D8 188 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 BUB1B-PAK6H3BSN5 160 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 CHST1O43916 411 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 DIRAS3O95661 229 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 IFNA6P05013 189 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 SNRNP70P08621 437 aaKnown RBP5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 VSIG10L2P0DP72 767 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 ANXA7P20073 488 aaKnown RBP5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 GATA3P23771 443 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 HTR1DP28221 377 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 UBE2MP61081 183 aaKnown RBP5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 SSBP1Q04837 148 aaKnown RBP5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 ASAH1Q13510 395 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 EIF4EBP1Q13541 118 aaPredicted RBP5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 HNF4GQ14541 408 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 SRSF7Q16629 238 aaKnown RBP eCLIP5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 C16orf87Q6PH81 154 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 ZNF833PQ6ZTB9 187 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 TMED4Q7Z7H5 227 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 MOB3BQ86TA1 216 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 ZNF554Q86TJ5 538 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 FAM219AQ8IW50 185 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 LINC00311Q8N616 119 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 POC5Q8NA72 575 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 BEND2Q8NDZ0 799 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 OR10A7Q8NGE5 316 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 NANPQ8TBE9 248 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 ZNF596Q8TC21 504 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 TCTEX1D2Q8WW35 142 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 CAPSLQ8WWF8 208 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 CFHR4Q92496 578 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 ST6GALNAC6Q969X2 333 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 RPEQ96AT9 228 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 RITA1Q96K30 269 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 NABP2Q9BQ15 211 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 AGMATQ9BSE5 352 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 MS4A7Q9GZW8 240 aaPredicted RBP5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 ESM1Q9NQ30 184 aa5.21□□□□□ -1.58
DEPDC4-201ENST00000299185 IGHV1-3A0A0C4DH29 117 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 hCG_1809904A0A1W2PP81 198 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 A0A1W2PPE2 198 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 A0A1W2PR64 198 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 A0A1W2PRV1 198 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 DNAJC9-AS1A6NH13 148 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 H3BUX3 64 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 RAMP3O60896 148 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 RGS11O94810 467 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 IGKV1D-33P01593 117 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 IGKV1-33P01594 117 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 CT45A6P0DMU7 189 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 CT45A5P0DMU8 189 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 CT45A7P0DMV0 189 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 SRD5A1P18405 259 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 LGALS4P56470 323 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 BRWD1-AS2P59051 145 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 ZNF816Q0VGE8 651 aaPredicted RBP5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 MEF2DQ14814 521 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 SLC9A3R2Q15599 337 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 IZUMO4Q1ZYL8 232 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 TMEM95Q3KNT9 176 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 TMEM30BQ3MIR4 351 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 SP6Q3SY56 376 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 HIST2H2BDQ6DRA6 164 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 C11orf87Q6NUJ2 197 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 CCBE1Q6UXH8 406 aaPredicted RBP5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 C1orf122Q6ZSJ8 110 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 NRARPQ7Z6K4 114 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 TGIF2LXQ8IUE1 241 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 ARRDC1Q8N5I2 433 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 ZNF645Q8N7E2 425 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 BVESQ8NE79 360 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 OR52B4Q8NGK2 314 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 OR6F1Q8NGZ6 308 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 GIMAP1Q8WWP7 306 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 RTN4IP1Q8WWV3 396 aaPredicted RBP5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 SEC22CQ9BRL7 303 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 TOLLIPQ9H0E2 274 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 C20orf85Q9H1P6 137 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 C5orf66Q9H5L9 145 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 RAB9BQ9NP90 201 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 DPM3Q9P2X0 92 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 ZNF221Q9UK13 617 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 AMMECR1Q9Y4X0 333 aaPredicted RBP5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 TLN2Q9Y4G6 2542 aa5.2□□□□□ -1.58
DEPDC4-201ENST00000299185 ZNF469Q96JG9 3925 aaPredicted RBP5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 A0A0B4J293 547 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 LEUTXA8MZ59 168 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 H0YJW9 148 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms