RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 COL27A1Q8IZC6 1860 aaPredicted RBP16.1■□□□□ 0.17
TRA2A-201ENST00000297071 PTPRBP23467 1997 aa16.09■□□□□ 0.17
TRA2A-201ENST00000297071 TMEM30CPA0ZSE6 113 aa16.09■□□□□ 0.17
TRA2A-201ENST00000297071 C1QTNF9BB2RNN3 333 aa16.09■□□□□ 0.17
TRA2A-201ENST00000297071 PDGFBP01127 241 aaPredicted RBP16.09■□□□□ 0.17
TRA2A-201ENST00000297071 SNRPCP09234 159 aaKnown RBP16.09■□□□□ 0.17
TRA2A-201ENST00000297071 RAC2P15153 192 aa16.09■□□□□ 0.17
TRA2A-201ENST00000297071 RAB4AP20338 218 aa16.09■□□□□ 0.17
TRA2A-201ENST00000297071 SOX8P57073 446 aa16.09■□□□□ 0.17
TRA2A-201ENST00000297071 PAFAH1B2P68402 229 aa16.09■□□□□ 0.17
TRA2A-201ENST00000297071 FIP1L1Q6UN15 594 aaKnown RBP16.09■□□□□ 0.17
TRA2A-201ENST00000297071 R3HDM4Q96D70 268 aa16.09■□□□□ 0.17
TRA2A-201ENST00000297071 TRAPPC1Q9Y5R8 145 aa16.09■□□□□ 0.17
TRA2A-201ENST00000297071 MED12LQ86YW9 2145 aa16.08■□□□□ 0.17
TRA2A-201ENST00000297071 LILRA1O75019 489 aa16.08■□□□□ 0.17
TRA2A-201ENST00000297071 Q8N7P7 452 aa16.08■□□□□ 0.17
TRA2A-201ENST00000297071 OR2M7Q8NG81 312 aa16.08■□□□□ 0.17
TRA2A-201ENST00000297071 PPP1R14DQ9NXH3 145 aa16.08■□□□□ 0.17
TRA2A-201ENST00000297071 NAGKQ9UJ70 344 aa16.08■□□□□ 0.17
TRA2A-201ENST00000297071 EYSQ5T1H1 3165 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 GTF3C1Q12789 2109 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 XIRP2A4UGR9 3374 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 NCOR1O75376 2440 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 MUC6Q6W4X9 2439 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 OOEPA6NGQ2 149 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 SIRPB1O00241 398 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 CA6P23280 308 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 FOXG1P55316 489 aaPredicted RBP16.08■□□□□ 0.16
TRA2A-201ENST00000297071 GNB1P62873 340 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 TFF3Q07654 80 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 TRIP6Q15654 476 aaKnown RBP16.08■□□□□ 0.16
TRA2A-201ENST00000297071 FAM78BQ5VT40 261 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 PMS2CLQ68D20 193 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 FAM180AQ6UWF9 173 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 SCCPDHQ8NBX0 429 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 GATAD1Q8WUU5 269 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 GALMQ96C23 342 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 TMEM204Q9BSN7 226 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 HES4Q9HCC6 221 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 ELOVL5Q9NYP7 299 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 CLN8Q9UBY8 286 aa16.08■□□□□ 0.16
TRA2A-201ENST00000297071 EREGO14944 169 aa16.07■□□□□ 0.16
TRA2A-201ENST00000297071 CRYABP02511 175 aaKnown RBP16.07■□□□□ 0.16
TRA2A-201ENST00000297071 OR4A8P0C604 315 aa16.07■□□□□ 0.16
TRA2A-201ENST00000297071 SNHG12Q9BXW3 62 aa16.07■□□□□ 0.16
TRA2A-201ENST00000297071 WASF3Q9UPY6 502 aa16.07■□□□□ 0.16
TRA2A-201ENST00000297071 LY96Q9Y6Y9 160 aa16.07■□□□□ 0.16
TRA2A-201ENST00000297071 A0A0U1RQK1 487 aa16.06■□□□□ 0.16
TRA2A-201ENST00000297071 ZNF320A2RRD8 509 aa16.06■□□□□ 0.16
TRA2A-201ENST00000297071 G6PCP35575 357 aa16.06■□□□□ 0.16
TRA2A-201ENST00000297071 OR1L1Q8NH94 360 aa16.06■□□□□ 0.16
TRA2A-201ENST00000297071 BCL2L2Q92843 193 aaPredicted RBP16.06■□□□□ 0.16
TRA2A-201ENST00000297071 HSD17B10Q99714 261 aaKnown RBP16.06■□□□□ 0.16
TRA2A-201ENST00000297071 C20orf144Q9BQM9 153 aa16.06■□□□□ 0.16
TRA2A-201ENST00000297071 PCSK5Q92824 1860 aa16.06■□□□□ 0.16
TRA2A-201ENST00000297071 A0A1B0GWJ7 208 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 ZG16O60844 167 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 OTX2P32243 289 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 MPLP40238 635 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 OPRK1P41145 380 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 TMPRSS3P57727 454 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 RPL30P62888 115 aaKnown RBP16.05■□□□□ 0.16
TRA2A-201ENST00000297071 RPP30P78346 268 aaKnown RBP16.05■□□□□ 0.16
TRA2A-201ENST00000297071 ZNF766Q5HY98 468 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 C9orf135Q5VTT2 229 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 TEX38Q6PEX7 206 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 H2BFWTQ7Z2G1 175 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 WDR86Q86TI4 376 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 PRR7Q8TB68 274 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 POLR3KQ9Y2Y1 108 aaPredicted RBP16.05■□□□□ 0.16
TRA2A-201ENST00000297071 RAMP3O60896 148 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 S1PR2O95136 353 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 KRASP01116 189 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 PDLIM3Q53GG5 364 aaPredicted RBP16.05■□□□□ 0.16
TRA2A-201ENST00000297071 C5orf30Q96GV9 206 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 SFRP2Q96HF1 295 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 TMEM68Q96MH6 324 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 OR2D2Q9H210 308 aa16.05■□□□□ 0.16
TRA2A-201ENST00000297071 MDFIC2A0A1B0GVS7 189 aa16.04■□□□□ 0.16
TRA2A-201ENST00000297071 C15orf62A8K5M9 175 aa16.04■□□□□ 0.16
TRA2A-201ENST00000297071 HMGB3O15347 200 aaKnown RBP16.04■□□□□ 0.16
TRA2A-201ENST00000297071 NXPH2O95156 264 aa16.04■□□□□ 0.16
TRA2A-201ENST00000297071 CHRNA7P36544 502 aa16.04■□□□□ 0.16
TRA2A-201ENST00000297071 TDGF1P3P51864 188 aa16.04■□□□□ 0.16
TRA2A-201ENST00000297071 BRWD1-AS2P59051 145 aa16.04■□□□□ 0.16
TRA2A-201ENST00000297071 RANP62826 216 aaKnown RBP16.04■□□□□ 0.16
TRA2A-201ENST00000297071 DCAF10Q5QP82 559 aa16.04■□□□□ 0.16
TRA2A-201ENST00000297071 PEAR1Q5VY43 1037 aaPredicted RBP16.04■□□□□ 0.16
TRA2A-201ENST00000297071 OR52E5Q8NH55 327 aa16.04■□□□□ 0.16
TRA2A-201ENST00000297071 TRAV39A0A0B4J263 110 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 HAND1O96004 215 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 MT-CO3P00414 261 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 SELEP16581 610 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 BTF3P20290 206 aaKnown RBP16.03■□□□□ 0.16
TRA2A-201ENST00000297071 PLGLB1Q02325 96 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 OR1C1Q15619 314 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 TBC1D28Q2M2D7 210 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 TRAT1Q6PIZ9 186 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 PRR18Q8N4B5 295 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 ZCCHC14Q8WYQ9 949 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms